Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1431 ATGTTCTCCAGAAACCGGCGGTTCGCGTCGTCTTCTTCTCCATCGTCGTCGTCGGAGAAGAAGCCCTCGGTTTCGGAAAGTTCCAGAAAGAAGGTTGCTGCCGCGAAGGCCCACTCCTACACAAAGAAGCGCCCCGCCCTAGCCGACATCACCAACAACAGAAATGCCTCTCTCTCCGGTGCAAGAAGCTCTCTTGCTGCTTCATCCAAACCTATGGTTCCATGCGTGTCTAAGACTGCCAAGACAAAGAAGGAAAAAGTTATTTCTGGGAAGCCTTTGCAAGCCCTATTGAGTACAAAATCAAGTGGGTTGGGGCTTCCGAAAGGCACATGTTCAACCAGAAGTGGTCAGCCTAAGGCTGGAGTGCAAGCTTTACTTAATAGTATGATCCGTGCTTCAAGACGGATAGGCATTTCTCCAAGTAAATCCGTTAGCGATTCAGTTTCACTGCATGAGAGCACGTCAACCAATGATTCTTTGGAGAGCCCGGAATTTGAATATATGGACAATGATGTCGTATCCATCAAATCAATTGAGAATAGGACATGTAGCATTCTCAATATTTCAGACTTTCCAAAAATATCAGGAAGAATATGCAGTAATAGTACCATCACGAAGGTAGAAGCAAATGAAGTTGTGGATATCGACATCAATATCAAGGACCCACAATTTTGTACATCCATTGCCCATGAAATCTATGAATATTTGCATGTATCTGAGGAAATTAGAAGGCCGTCTTTGGACTATCTGGAGAACATTCAAAATGATATAAATTCTAGCATGCGGGCAATGCTCATTGATTGGCTTGTGGAGGTTGCCGAAGAGTACATGCTTCTACCTGATACACTATTTTTGGCAGTTAACTACATGGATCGCTATCTTTCTGGCAATGCAATGAATAAGAAGCGATTACAACTACTTGGTGTTGCCTGCATGATGATTGCTGCCAAATACGAGGAGATTTGTGCCCCTAAGGTGGAAGATTTCTGCTATGTAACTGATAATACATACTCTAAGGAGGAGGTGTTGCAGATGGAATCTGCTGTGCTGAATTTCTTGAAATTTGAGATGACAGCTCCAACGGTTAGATGTTTTTTGAGGCGCTTCGTTACTGTTGCCCAAAGAACCTGTGAGGCTCCGTTGTTGCTGTTGGAGTACTTGGCAGACTATCTCTCAGAGTTATCTCTTTTAGAGTATAGCATGCTTAAGTATACCCCATCATTGGTTGCTGCATCAGCCACTTTCTTGGCTAAATACATACTACTTCCTAGGAAGAAGCCTTGGAATTCTACTTTAAGGCATTACACAGGCTACCAATCACCAGAACTGCGTGAATGTGTTGTGGGACTGCATTGGTTGTGCTGTTATGGCTGTCATAACTTACCTGCCATTAGGGATAAATACAGTCAGCATAAGTTCAAGTTCGTGGCAAAGAAGTATTGTCCTGTGTCAATACCTCCAGAGGTATTCCAGAGTTAG 1479 0.4361 MFSRNRRFASSSSPSSSSEKKPSVSESSRKKVAAAKAHSYTKKRPALADITNNRNASLSGARSSLAASSKPMVPCVSKTAKTKKEKVISGKPLQALLSTKSSGLGLPKGTCSTRSGQPKAGVQALLNSMIRASRRIGISPSKSVSDSVSLHESTSTNDSLESPEFEYMDNDVVSIKSIENRTCSILNISDFPKISGRICSNSTITKVEANEVVDIDINIKDPQFCTSIAHEIYEYLHVSEEIRRPSLDYLENIQNDINSSMRAMLIDWLVEVAEEYMLLPDTLFLAVNYMDRYLSGNAMNKKRLQLLGVACMMIAAKYEEICAPKVEDFCYVTDNTYSKEEVLQMESAVLNFLKFEMTAPTVRCFLRRFVTVAQRTCEAPLLLLEYLADYLSELSLLEYSMLKYTPSLVAASATFLAKYILLPRKKPWNSTLRHYTGYQSPELRECVVGLHWLCCYGCHNLPAIRDKYSQHKFKFVAKKYCPVSIPPEVFQS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1431 492 Pfam Cyclin, C-terminal domain 360 478 IPR004367 -
Dod09g1431 492 Pfam Cyclin, N-terminal domain 231 357 IPR006671 -
Dod09g1431 492 PANTHER CYCLINS 31 491 IPR039361 -
Dod09g1431 492 SMART cyclin_7 364 452 IPR013763 -
Dod09g1431 492 SMART cyclin_7 267 351 IPR013763 -
Dod09g1431 492 SMART Cyclin_C_2 360 482 IPR004367 -
Dod09g1431 492 ProSitePatterns Cyclins signature. 262 293 IPR006671 -
Dod09g1431 492 Gene3D - 245 358 - -
Dod09g1431 492 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 31 491 - -
Dod09g1431 492 SUPERFAMILY Cyclin-like 360 482 IPR036915 -
Dod09g1431 492 MobiDBLite consensus disorder prediction 140 162 - -
Dod09g1431 492 Gene3D - 231 478 - -
Dod09g1431 492 CDD CYCLIN 358 447 IPR013763 -
Dod09g1431 492 PIRSF Cyclin_A_B_D_E 1 489 IPR039361 -
Dod09g1431 492 MobiDBLite consensus disorder prediction 1 22 - -
Dod09g1431 492 MobiDBLite consensus disorder prediction 1 54 - -
Dod09g1431 492 CDD CYCLIN 261 350 IPR013763 -
Dod09g1431 492 SUPERFAMILY Cyclin-like 220 357 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1431 Dod-Chr9 35721003 35731531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1431 20 492 Core Cell Cycle Gene Families AT1G44110 50.311 2.41e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1431 K06627 - qsu:112028128 500.36