Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1429 ATGAAGTTGTTCGCGTCCTCACTAACACCCTCGAAACCGGAAGCTGCCCCCACATGCTCTTCTATAGTCCCTCCGACACCGGAAAAACCACTACCACTCTTGCAATTGCCCATCAGCTTTTCGGGCCTGAGCTATAGGGTGCTGGAGCTCAATACTAGTGATGATCGTGGGATTAATGTTGTTCACACTAAGATCAAAGATTTCGCTGCCGTGGCTATCGGTACCAATCAGCGCAAGAAGATTATAGAACCACTTGCTTTAAGATGCACAATATTTAGGTTCAAGCCATTGTCCGAAGAGATCATGAGCAACCGAATATTGTACATTTGCAATGAAGAAGGACTCAATCTCGATGCAAAGGCTCTTTCAACCCTGAGTTCTATTTCTCAAGGAGATCTTCGTCGGGCTATCACGTACTTGCAATCAGCTGCTCGCTTATTTGGATCTTCCATTTCTTCAGAGGACCTAATTTCTGTATCTGGGGTTGTGCCAGTGGAGGTGGTGGAGGCACTTCTTAAAGCATTCAAAAGTGGTAATTTTGATTTAGCCAACAAGGAAGTGAACAGTTTTATCGACGAGGGATATCCAGCCTCTCAGATGCTAACTCTGGTCTTGTTTTTCCTAGTTTCATCAGGCAATTATTTTTTATTTGATGCCATTGTCGAAGATGACATATCTGATGAACAGAAGCCTAGAATATCCAAGAAGCTGGGCGAAGCAGATAAGTGCCTAGTTGATGGTGCTGATGAATACTTGCAGCTTCTTGACGTGGTCAGCAAAACAATGCAGGCTTTTTGTAACATGCCCGAAGGATTTGCCTACGACAGTTAG 831 0.4428 MKLFASSLTPSKPEAAPTCSSIVPPTPEKPLPLLQLPISFSGLSYRVLELNTSDDRGINVVHTKIKDFAAVAIGTNQRKKIIEPLALRCTIFRFKPLSEEIMSNRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSSISSEDLISVSGVVPVEVVEALLKAFKSGNFDLANKEVNSFIDEGYPASQMLTLVLFFLVSSGNYFLFDAIVEDDISDEQKPRISKKLGEADKCLVDGADEYLQLLDVVSKTMQAFCNMPEGFAYDS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1429 276 Gene3D - 99 162 - -
Dod09g1429 276 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 45 76 - -
Dod09g1429 276 SUPERFAMILY post-AAA+ oligomerization domain-like 164 260 IPR008921 GO:0003677|GO:0006260
Dod09g1429 276 MobiDBLite consensus disorder prediction 1 20 - -
Dod09g1429 276 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 75 264 - -
Dod09g1429 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 144 IPR027417 -
Dod09g1429 276 Pfam Replication factor C C-terminal domain 164 260 IPR013748 -
Dod09g1429 276 PANTHER REPLICATION FACTOR C SUBUNIT 4 75 264 - -
Dod09g1429 276 PANTHER REPLICATION FACTOR C SUBUNIT 4 45 76 - -
Dod09g1429 276 CDD HLD_clamp_RFC 97 156 - -
Dod09g1429 276 Gene3D - 163 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1429 Dod-Chr9 35714509 35718241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1429 24 272 Core DNA Replication Machinery Family AT1G21690 52.843 3.37e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1429 K10755 - gmx:100798331 306.99