Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1427 ATGGGAAGCCTGCAGCAGCAGCAGCAAGAGCAAGTGATGAGCGATGCAGCTATCTCATCGCGGGCTGCAGCACCTATTGGCAGCAACCGCATAGTTGCCGTCCATGTCTCACCTCCTAATAACAACTACCATCCAACATATGATCATCATGATGCCTCCTCAAATCATCAACAGAAAAGAGGTTGGAGAAATTTCCTGTCATATGTAGGTCCTGGTTTCCTCGTCTCTTTGGCATACCTTGATCCTGGAAACTTGGAAACTGATCTGCAAGCTGGAGCTGATCACGGATATGAGCTGCTGTGGGTTATACTTATTGGACTGGTTTTTGCACTTATAATTCAGTCATTGGCCGCAAATCTTGGCGTAAGCACTGGTAAACACCTTGCGGAAATTTGTAAAGCTGAGTACCCACTGCTTGTCAAGTACTGCTTATGGTTATTAGCGGAGCTTGCCGTCATAGCCGCAGACATACCTGAAGTGATTGGCACAGCCTTTGCGCTGAACATACTCTTCCACATCCCAGTATGGGTAGGGGTTCTAATAACTGGCTGCAGCACTCTCTTGCTTCTCGGTCTCCAGAGATTTGGGGTAAGGAAGTTGGAGTTGCTGATATCAGTGCTAGTTTTTGTGTTGGCAGCATGTTTCTTTGGGGAAATGAGTTACGTGAAACCCCCAGCTTCTGGAGTAATAAAGGGGATGTTTGTACCCAAGCTCAAAGGTCAAGGAGCCACTGGCGATGCCATTGCCCTTTTGGGTGCCCTTGTCATGCCGCACAACCTCTTCCTCCACTCTGCTCTCGTACTGTCTAGAAAAATACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATACTTTCTGATAGAGAGTGGGTTCGCATTGCTTGTGGCATTTCTAATCAACGTAGCAGTAGTTTCTGTGTCGGGCACTGTTTGCTCAGCCTCCAACCTTTCTGCAGAAAATAGTGATAAATGCAGCGATCTCACCCTTGACTCCGCTTCCTTCCTTCTCAAGAGTGTGTTGGGACGGTCCAGCTCAACCGTTTATGCCGTAGCACTGCTAGCCTCTGGACAAAGCTCTGCTATCACGGGAACCTATGCTGGCCAGTTCATCATGCAGGGTTTCTTGGACTTAAAGATGAAAAGATGGATTAGGAACTTGATGACAAGGTCCATCGCCATAACACCTAGTCTTATTGTCTCCATCATTGGTGGATCTTCTGGTGCTGGTCGCCTAATCATCATCGCTTCGATGATACTTTCTTTTGAGCTTCCCTTCGCATTGATTCCACTCCTCAAGTTTAGCAGCAGCAGTACCAAGATGGGGCCTCACAAGAATTCTATCATAATCATTGTCATCTCATGGATCCTAGGTCTGGGGATAATCGGCATCAATGTGTACTACCTCAGTACTTCCTTCGTGGGTTGGCTAATTCATAGCAGTCTACCAAAGGTGGCAAATGTGTTTATTGGGATCATAGTGTTCCCTCTGATGGCAATCTATGTTGCGTCAGTTATCTACCTTGCCTTCAGAAAAGACACTGTTCAGACATTTATAGAGACCAAGGATGACCCAGTAATGCAAACCCACTTGGAAAAGGGGGTCATGGATTCTAATGGTCAGTTGGAGTTGAGCCATGGTCCTGTTAGAGAAGATTTAGCTGATATCCCACTACCGGAGTAG 1683 0.4688 MGSLQQQQQEQVMSDAAISSRAAAPIGSNRIVAVHVSPPNNNYHPTYDHHDASSNHQQKRGWRNFLSYVGPGFLVSLAYLDPGNLETDLQAGADHGYELLWVILIGLVFALIIQSLAANLGVSTGKHLAEICKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWVGVLITGCSTLLLLGLQRFGVRKLELLISVLVFVLAACFFGEMSYVKPPASGVIKGMFVPKLKGQGATGDAIALLGALVMPHNLFLHSALVLSRKIPSSVRGINDACRYFLIESGFALLVAFLINVAVVSVSGTVCSASNLSAENSDKCSDLTLDSASFLLKSVLGRSSSTVYAVALLASGQSSAITGTYAGQFIMQGFLDLKMKRWIRNLMTRSIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILGLGIIGINVYYLSTSFVGWLIHSSLPKVANVFIGIIVFPLMAIYVASVIYLAFRKDTVQTFIETKDDPVMQTHLEKGVMDSNGQLELSHGPVREDLADIPLPE* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1427 560 PANTHER METAL TRANSPORTER NRAMP5 55 560 - -
Dod09g1427 560 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 63 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 Pfam Natural resistance-associated macrophage protein 86 447 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 55 560 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 Hamap Divalent metal cation transporter MntH [mntH]. 49 473 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 144 170 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 417 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 197 218 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 385 402 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 247 270 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 357 376 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod09g1427 560 PRINTS Natural resistance-associated macrophage protein signature 172 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1427 Dod-Chr9 35677022 35683056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1427 58 560 Inorganic Solute Cotransporters AT1G15960 62.103 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1427 K21398 - gmx:100787785 889.797