Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1422 ATGGCGGATTCAAGGGTGGACACGATTGCCAGATTAGCCCAATGGAAAATCGACAACTTCGGACCCTGTTCCTACAAAAAGTCCGACCCTTTCAAGGTCGGAATCTGGAACTGGCACTTATCGATAGAGAGGAATAGGTACCTGTACATACATCTTTTTCCAGAAACTTCTCGGGTTTCTAAGGAGCACCCTCCCGTTGCTCGTTTCATTCTTCGAGTCTCCAATGCTGGCTCATCCCGCAGGTTTTATATTTCTCCTGTTCATGAAAGGCTGCTTAGGTCATATGATGACTTTGTCTGGCCTGTTGATACTACATTTGTTGGCCGCTTCATTATTGACGTTGAATTTCTTGACCTGAAGATATGCCCTATAAATGGTGGGGAAGCTAGTTCCATATGGCCGTCTGATGGAAAATTGCAATCCATTGCAACTGAAAGTACTCTTAGTTGCCTCTCTCACATGCTTGATGAGGCTATACATGCTGACCTGACCATTGTCACGGCAGATGGTACACTGAGAGCTCACAAGGCAATTTTGTCTGCAAGTTCTCCTGTGTTCCAGAGTATGTTTCATCACAACCTGAAGGAGAAAGAGTCATCCACAATCCATATAGAAGACATGTCACGTGAATCCTGCATGGCTCTTCTAAGTTACTTGTACGGAACGATCAAACAAGACGATTTCTGGAGTCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATTTGTGGTCTCAAAGATGTCTGCGAGGAAAGTCTGCTGGAAGATCTTAACTCAGGAAATGTTCTCGAGAGGCTAAACGAGGCTTGGCTTTATCAGTTACACAAATTAAAGAAAGGATGCTTGACGTTCTTATTTGAATTTGGTAAGATATATGATGTTAGGGATGAAATAAATATCTTTTTCCAGCATGCTGACAGGGAGCTAATGTTAGAGATGTTTCAGGAAATGCTTACAGTTTGGAAACCAGCATAG 981 0.4312 MADSRVDTIARLAQWKIDNFGPCSYKKSDPFKVGIWNWHLSIERNRYLYIHLFPETSRVSKEHPPVARFILRVSNAGSSRRFYISPVHERLLRSYDDFVWPVDTTFVGRFIIDVEFLDLKICPINGGEASSIWPSDGKLQSIATESTLSCLSHMLDEAIHADLTIVTADGTLRAHKAILSASSPVFQSMFHHNLKEKESSTIHIEDMSRESCMALLSYLYGTIKQDDFWSHRLALLGAANKYDICGLKDVCEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCLTFLFEFGKIYDVRDEINIFFQHADRELMLEMFQEMLTVWKPA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1422 326 SUPERFAMILY POZ domain 145 257 IPR011333 -
Dod09g1422 326 CDD MATH 15 101 IPR002083 GO:0005515
Dod09g1422 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Dod09g1422 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Dod09g1422 326 PANTHER OS08G0495500 PROTEIN-RELATED 3 325 IPR044714 -
Dod09g1422 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Dod09g1422 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Dod09g1422 326 Gene3D Potassium Channel Kv1.1; Chain A 136 288 IPR011333 -
Dod09g1422 326 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 3 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1422 Dod-Chr9 35640376 35644029 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod09g1422 BTB 3.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1422 K10523 - rcu:8278000 572.778