Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1417 ATGGAGGTTGTGGACACTAGAAAGCTACAGCTACAACAGCAGCAGCAGCAGCATTTTCATGTGTTGGCAGTTGACGACAGTGTCATTGATAGGAAGCTTTTGGAGAAACTCCTTACAGGTTCTTCATGGAAAGTTACCTGCGTGGACTCCGGTGACAAGGCCTTGAAATATCTTGGCCTGATTGATGACCTTGATAATACTTCTTCAACGTCTTCAGAATCATCATCTCCTCCTCCTCAGCCGCCATTTCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGATTATGTCATCAGAAAATGTACCTTCGAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAAGAGTTTTTATTGAAGCCTCTTCAGTCATCAGATTTGAAGAAGCTTCAGCCTTACCTTCTGAAATCCCTTGATAGTTCTTGTGAGCAAGAAACTGCTAATAGTTCCATAGATTCAGAGTCAGACAATGACAGTCTCATCAACAACAGCAGTAACAACAGTAATAACAATAATAGTATTAGCAAAAGGAAGGCCAAGTCTCCTGAGCCTCCAGAGAGATCAAGACCTAAAATGAAAGGGTGTGATTGA 672 0.4241 MEVVDTRKLQLQQQQQQHFHVLAVDDSVIDRKLLEKLLTGSSWKVTCVDSGDKALKYLGLIDDLDNTSSTSSESSSPPPQPPFQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQSSDLKKLQPYLLKSLDSSCEQETANSSIDSESDNDSLINNSSNNSNNNNSISKRKAKSPEPPERSRPKMKGCD* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1417 223 MobiDBLite consensus disorder prediction 171 223 - -
Dod09g1417 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 7 221 - -
Dod09g1417 223 SMART REC_2 19 158 IPR001789 GO:0000160
Dod09g1417 223 SUPERFAMILY CheY-like 19 163 IPR011006 -
Dod09g1417 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 221 IPR045279 GO:0009736
Dod09g1417 223 ProSiteProfiles Response regulatory domain profile. 20 162 IPR001789 GO:0000160
Dod09g1417 223 MobiDBLite consensus disorder prediction 171 205 - -
Dod09g1417 223 Gene3D - 20 204 - -
Dod09g1417 223 MobiDBLite consensus disorder prediction 66 85 - -
Dod09g1417 223 MobiDBLite consensus disorder prediction 206 223 - -
Dod09g1417 223 Pfam Response regulator receiver domain 89 156 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1417 Dod-Chr9 35558793 35561774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1417 16 164 Response Regulator Gene Family AT3G57040 58.667 6.77e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g1417 Response_reg 1.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1417 K14492 - gmx:100786187 295.049