Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1410 ATGGCTTCAGAACTTCAATTGCCTCCTGGATTCAGATTCCATCCAACGGATGAGGAGCTTGTGATGCACTACCTCTGCCGCAAATGCACGTCGCAGCCCATCGCCGTTCCCATCATCGCAGAAATCGACCTCTATAAGTACGACCCCTGGGACCTTCCTGGCTTGGCCTCTTATGGGGAGAAGGAGTGGTATTTTTTCTCTCCCAGGGACCGGAAATACCCAAATGGGTCGAGGCCGAACCGCGCAGCCGGAACAGGTTACTGGAAGGCAACAGGCGCAGATAAACCTATTGGACAGCCGAAACCAGTTGGGATCAAGAAAGCTTTGGTATTTTATGCCGGGAAAGCACCCAAAGGAGACAAGACTAATTGGATTATGCACGAGTATCGCCTTGCGGATGTGGATCGCTCTGTTCGCAAAAAGAACAGTTTAAGGCTGGATGACTGGGTGCTCTGCCGCATCTACAACAAGAAGGGAACAATCGAGAAACAACCAAGCAGCAGCGCTGTTCATTTCAGCCACAAAACAGAATCCTCGGATATTGAGGACAAGAAGCCGGACATCGTGCCACGTGGCGGCGCGCTTCCGCCGCATCCTCCGGCGCAAGTGTCGGCGGGAATGACGGACTACATGTACTTCGACAAGTCAGACTCGATCCCGAAGTTGCACACGGACTCGAGCTGCTCGGAGCATGTGGTGTCGCCGGAGTTCGCGAGCGAGGTGCAGAGCGAGCCCAAGTTGAACGATTGGGAGAAGAACCTCGATTTTCCCTATAATTACATGGATACCACTCTCGGTAACGGCTTTGGGACGCAGTTCCAGAGCACCAATCAGATGTCGCCTCTGCAGGACATATTCATGTACCTGCAGAAACCTTTCTGA 882 0.5283 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKQPSSSAVHFSHKTESSDIEDKKPDIVPRGGALPPHPPAQVSAGMTDYMYFDKSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKLNDWEKNLDFPYNYMDTTLGNGFGTQFQSTNQMSPLQDIFMYLQKPF* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1410 293 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Dod09g1410 293 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Dod09g1410 293 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Dod09g1410 293 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Dod09g1410 293 PANTHER NAC TRANSCRIPTION FACTOR 56 2 271 - -
Dod09g1410 293 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1410 Dod-Chr9 35438974 35441077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1410 1 293 NAC Transcription Factor Family AT1G01720 71.523 4.02e-150 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g1410 NAM 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1410 - - gmx:100805768 506.138