Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1396 ATGGCGGGAACAAAGCCGCATTCCCTCCAAAAATTTCTGACCCAATTTTTTCAAGCCCCAAATTCATTCTCCAATAAACCAAAATCCCTAATTCATCTCAGCAACCCACTGCGATTGCGATGGAGGGCCCCTTCACCGAAGTCAGCCCCTGCAATGCCGCCGCCGCCGCCACCACGACGTCCACGCGCCGCAGTGTCCGGCGGAGGTTGGTCCAGTCCACGCTGTTCCCTCTCAATCACAAAACACCTCAACCCAACCCCAATGACCACGAAAATGACGACGATGAACAAGACAACGATTACTCCCCCTGGTCACAATCACAAGAAAAGGAAGAAACCCAAGCCTAAGCTCACTCCTCCAGAAAAACCCTCCAAGAATAGCACGCCTAAGAAGAATGCATTGGCTAATGGGAACAAGGGATCAACTTCGCGGCAAGTGTTGGCTGATGCTGCTGAGTTTGATACACATACACCCGTGCCTGATTTGCGGATAGAGGCAAAACTCTCAGCTGAGGAAAATTCAAGGATGTTTGCAGGGAGGCAAATACATCCATTTTTTAACTCATGGAAAGTGGGGAAGAAATCTCAGGAACAAGCTGAATCAGGAAATAAATTATGCACAGCTAAGTGGGAGGATGAAACAAATGTGTGTGGTCCTATTCATGTATTCGAAAATATTCAGGAGGGTACCTCATCCCTTGACTGGAGAAGCTGGACCTTTTTGGGAATAGATGCCTGTGTGAATTATGGTCCAGAAAGTTCGAATTCACCTGTTTTGGGGGGTTCTGTTGAATCCTTAAATGTTGATAAGATTCTTAGTACTTTGGATCCTTCAGGTGTTTCAGTTTCACATAATGCATTGTCTTCTTCAGATAGACTTTCTATACAGCCAGAAAATCTGCAAGAAACATCACCATCAAGCTCAGCTTCGCTAGCTAATGAGCAAACAATATGTCCTCAGATGCCAAAAGATGCTAAAATGGACCGGGAAGTTGATGAATCTGTTACTTTTTCTGGGCAAGCTGGCTTTTTCAGTAAGTCAGACACCAAGCCATTGAGTAGATTTCTTCATGAAAGTATGTGGTCATACTACCATAGTTGTAAAGATAAGGCTGAGGCCAGCTTATGGACATACAAGTACAAACCAACAAAGGCCATTGAGGTATGTGGTAATGATGAATCTGTGAATTTCTTGCGTGACTGGTTACATCTTTGGCATGAAAGGCGTTATCAAAGAAGGAAGGATTCCCCTAATAGGCATAAAAGAGACATGCAAGAAGCTGATGATGACGATGATGATTATAACTGTTCTTTTAGTGATTATGATTCAGAAGATGTAAATGAGGAGGATTCCCTGCAGAATGTTCTTTTAATTACAGGGCCAATAGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGAGATTTTTGAGCTCAATGCATCGCATTGTCGGAATGCGCCTGCTGTCAAGCAGTATTTTGGAGATACGCTTGGATCACTTGGTTTCAAAAGATTATCGGAAGACAATGCAAGTTCACAAAAGAAAACTACGAAATCTCCCCCAGGTCTGCCTTTGCCTAATGGTAAAGCAGCTGATGAGATGGATGATGGGGTGGTTGAACTGATAACCATATCTGATGAAGAAGCTTGTAGTCCTGGTGGAACATCACGGAAGTTGCTTTGCAAAAATAATGTATTTACATGTCATAAAGTCCAAACTTTGATTCTAGTTGAGGAGGTGGACATCCTTTTTCCTGAAGATCGTGGATGCATTGCTGCCATACAACAGATTGCTGAGACTGCAAGGGGGCCAATTATATTGATCAGCAATAGTGATAATCCTCGCCTGCCAGATAATTTTGATAGGCTCCATGTTTCTTTTTCTTTGCCATCCCCAAAGGAGTTGCTGTGTCATCTATACACGGTTTGTGTCACTGAAGGAGTTGACATCCATCCTCTTTTACTAGAGAGGTTTATACGGTCTTGTAATGGAGACATCCGAAAAACCATTATGCATCTTCAGTTCTGGTTCCAGAGTAAAATATTTAGAAAAGATGGAGAAGGGCCAAATGGTTTTGGTTCACTTCCATTTGATCTTGAGGTTGGCCATCAAATCTTGCCAAAAACAATGCCCTGGGATTTCCCCTCACAGTTATCTGAACTAGTCGAGAAAGAACTCACCAAATCAATATCAATAATGGAAGAAAACTCTGGGATGCAAGGGTTACTTACGGAAGAGCTTCACATAAATGAAAGGCAAAATGATTTAGATGTGCACTATATGGGGGCTGATTATATAGAGGCCAAAAAAATGGAGATGATTAAGAGAAATGGATCTATAGCAGACTACAGTGAGCTTGAAATTCAATATAATACTATTTCTGAGTTTTCTGATTCTTTTGGGTCCCCACCATCCTCGTGGCAAAATGTCAGTCGAAGGAAACTTGGAGGGAAACTTGTAGTGATGTCCTCTGATTCTGAGGATGAGTATCCAGATAATGCACATCCTCTACACACACTTGACGAAGCTAACAAGAGCCAATCCCTTGAAGATAACAGTGAGTCTCCGTCTGAGTTTCCATTGAATGAAAACTACCCCAGCACATCAGTTCGCAAACTGGTTTGTTATGAATTGGAGGATTCTGAGGAGGAACAATTTATATATTCAGAAACAGCTGATGATACATGTTTAAATGAAACATGTAAATCGTTAGATGTATCCTGTGTGCCAGAATCAACCTTTGTCCCCGAGACTGCAATTGAAAATGGAGCAGAGACAATGTCTGGAGCAGTGTCTTCTGGCCATTTTGCTGGTCATCCAGAAGTTTCTGTGAATAATGAGTTGAAACCATTAACTTTAGGTGTTCGTAGGCGGTTAGTAAAATGGCCACAAAATTCAGATTTTTTGAATACTGAGATTCCAGAATGCCCTCCAAAAGTGGCTGTGCAGGATTTTCAAGATGAAAATATGGACACTACAATTGTCAATGTGATGGATGAGTGCAGTCGTGTGGATTTCCGGCTGAAGTCAAAGTTTGTGGAGTCCTGTGCATCAATAGAGACAGATATAATGCAAAAATTGTGGAAAAACCTCCGTGAGTGTCGAATGGATTTAAGACAGCATGCCTCCTCAGAGAAGTTAGGTGCTTGTGAAGTTGTACAACTGGTTAGTGGTCTGAGCAATCTGATTTCAGAAGCCGACCTGTTTTTTAATCATCAACCAAAACAAAGTGATGTTATGGAACCTCCAATGTCCCCTTCTGATGAAGCCACGTCTATTTGGTATGATGAGCAAACAATGATGTCCAATGTTGCTGTTAAGGGGTTTTGTTTCTATGCTAAACGTATAGCAGATGTGGGATTAAAGTTGGGTTGTGAGAACAGGGTTGATTTAACTTCTGAGACGTGGGCTTCCACAACTAATGTTATGGCATTGGGGAAATTATCCAGACTGGATCTCACAAAAAGCGTGGATATCTACACTGGAAAGGAATTAGAGCTGAACAACCCAATAAATGTTGTGCAGAAGAGTGAAACCAATACACCTCTGTTCAACGTCATCCAGTCTATTGTTCCTGCAAAAATATCCTTGGCACTGAAAGGCGTTGCTTTCAATGAGTATCTTTCCTCATTGCGCCAAATTTCAAGATCAGAAGCTTTCCGAGTTGAACAAGGTGTTAGCAGACGAGGAAGGGTGCGGGGTGCTCAACATTACCTGAGCAGATGCACAATGTTGTCTCCTGAAGATATATCGTTAGTGAATGAAGGTGATTTCTTCACAATGTACAGCTAA 3810 0.4231 MAGTKPHSLQKFLTQFFQAPNSFSNKPKSLIHLSNPLRLRWRAPSPKSAPAMPPPPPPRRPRAAVSGGGWSSPRCSLSITKHLNPTPMTTKMTTMNKTTITPPGHNHKKRKKPKPKLTPPEKPSKNSTPKKNALANGNKGSTSRQVLADAAEFDTHTPVPDLRIEAKLSAEENSRMFAGRQIHPFFNSWKVGKKSQEQAESGNKLCTAKWEDETNVCGPIHVFENIQEGTSSLDWRSWTFLGIDACVNYGPESSNSPVLGGSVESLNVDKILSTLDPSGVSVSHNALSSSDRLSIQPENLQETSPSSSASLANEQTICPQMPKDAKMDREVDESVTFSGQAGFFSKSDTKPLSRFLHESMWSYYHSCKDKAEASLWTYKYKPTKAIEVCGNDESVNFLRDWLHLWHERRYQRRKDSPNRHKRDMQEADDDDDDYNCSFSDYDSEDVNEEDSLQNVLLITGPIGSGKSAAVYACAQEQGFEIFELNASHCRNAPAVKQYFGDTLGSLGFKRLSEDNASSQKKTTKSPPGLPLPNGKAADEMDDGVVELITISDEEACSPGGTSRKLLCKNNVFTCHKVQTLILVEEVDILFPEDRGCIAAIQQIAETARGPIILISNSDNPRLPDNFDRLHVSFSLPSPKELLCHLYTVCVTEGVDIHPLLLERFIRSCNGDIRKTIMHLQFWFQSKIFRKDGEGPNGFGSLPFDLEVGHQILPKTMPWDFPSQLSELVEKELTKSISIMEENSGMQGLLTEELHINERQNDLDVHYMGADYIEAKKMEMIKRNGSIADYSELEIQYNTISEFSDSFGSPPSSWQNVSRRKLGGKLVVMSSDSEDEYPDNAHPLHTLDEANKSQSLEDNSESPSEFPLNENYPSTSVRKLVCYELEDSEEEQFIYSETADDTCLNETCKSLDVSCVPESTFVPETAIENGAETMSGAVSSGHFAGHPEVSVNNELKPLTLGVRRRLVKWPQNSDFLNTEIPECPPKVAVQDFQDENMDTTIVNVMDECSRVDFRLKSKFVESCASIETDIMQKLWKNLRECRMDLRQHASSEKLGACEVVQLVSGLSNLISEADLFFNHQPKQSDVMEPPMSPSDEATSIWYDEQTMMSNVAVKGFCFYAKRIADVGLKLGCENRVDLTSETWASTTNVMALGKLSRLDLTKSVDIYTGKELELNNPINVVQKSETNTPLFNVIQSIVPAKISLALKGVAFNEYLSSLRQISRSEAFRVEQGVSRRGRVRGAQHYLSRCTMLSPEDISLVNEGDFFTMYS* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1396 1269 MobiDBLite consensus disorder prediction 41 144 - -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 412 427 - -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 412 434 - -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 71 102 - -
Dod09g1396 1269 Gene3D - 636 691 - -
Dod09g1396 1269 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 127 1266 IPR004582 GO:0006281
Dod09g1396 1269 MobiDBLite consensus disorder prediction 514 536 - -
Dod09g1396 1269 Gene3D - 373 633 IPR027417 -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 121 144 - -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 47 62 - -
Dod09g1396 1269 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 127 1266 - -
Dod09g1396 1269 MobiDBLite consensus disorder prediction 292 313 - -
Dod09g1396 1269 CDD AAA 456 515 - -
Dod09g1396 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 684 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1396 Dod-Chr9 35310495 35320529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1396 372 681 Core DNA Replication Machinery Family AT5G22010 24.684 2.58e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1396 - - gmx:100784209 1473.37