Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1382 ATGGTTAAGGCAGAGAACAAGATCCACACAGAACCATCAAAGCCAATGAGACCTTTATCCTCATCCTCATCATCATCAGGATCAGATATCACGAAGAAAAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTATCAGAGATTAGAGCACCAAACCAGAAGACAAGGATATGGCTAGGGTCTTATTCAACCGCAGAAGCAGCTGCAAGAGCCTATGATGCTGCACTTCTATGCCTCAAAGGCCCCTCAGCAAATCTCAATTTCCCTTTGAATAGTTCTTCACAATATATAAACATTCCTCAAGACACTGTCATGTCCCCAAAATCAATCCAAAGACTTGCTGCAGCTGCTGCTAATAGCTTTGTTGACATCAATAATGCCAGCACCCTCACCTTCCCCTCCACCTGCTTCAACCCCATCATCATCATCTTCTGTATCTTCCCCATCAATGGCTTCTTCTCCCTCTGA 474 0.4494 MVKAENKIHTEPSKPMRPLSSSSSSSGSDITKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPSANLNFPLNSSSQYINIPQDTVMSPKSIQRLAAAAANSFVDINNASTLTFPSTCFNPIIIIFCIFPINGFFSL* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1382 157 Gene3D AP2/ERF domain 33 93 IPR036955 GO:0003700|GO:0006355
Dod09g1382 157 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 13 127 - -
Dod09g1382 157 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Dod09g1382 157 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 MobiDBLite consensus disorder prediction 15 31 - -
Dod09g1382 157 MobiDBLite consensus disorder prediction 1 33 - -
Dod09g1382 157 CDD AP2 33 91 IPR001471 GO:0003700|GO:0006355
Dod09g1382 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1382 Dod-Chr9 35160700 35161173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1382 1 123 AP2-EREBP Transcription Factor Family AT1G21910 63.830 1.26e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod09g1382 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1382 - - gmx:100819512 185.267