Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1376 ATGGACATAAACATAGACATGCATAACAACCTCGACTTCTCCGGATACAGCAGCGCCACCACAAACACCAACACTCCCTCTTCCGACGACGACCCTGCACCCTGCAACTGGAACCACTGGTCCCCCGTCGTCAACTGGGACGCCTTCGCCGCCCCCCACGACGACTTCCACCACCTCATCGACTCCATGATGGACGTCGACTCCGCCCCCCTCCACCTCACCCCTGACGCCCCCACTTCGCCTTCCACAGCCGGAGAGGACGACGAGGACGCAACCACCACCACCACCGCCGACGAACCAGCACAACCGCCAGCACCAGCAGCAAAAAGCGTCGACGCAGACGACACGAAGGGCCTGAGGCTGGTGCACCTGCTGATGGCGGCGGCGGAGGCGCTCACCGTCCCCACCAAGAGCCGCGACCTGGCTCGAGTGATATTGCTTCGACTCAAGGAGTTGGTCCCCCTCGCCACCACCACCGCTGCCACCCACGCCTCCAACATGGAAAGACTCGCGGCGCATTTTACCCACGCTCTCCATGCGTTGCTAGACGGCACAGGGGGTGCGCACAACATCAACAACATCAACCACAAACAGTACAACACCCACGTCAGCAGCACGAGTGGGTCCGATCAAACGGACACCGTCGCAGCGTTCCAACTGCTTCAGGACATGTCCCCTTACGTCAAGTTCGCCCACTTCACTGCCAATCAGGCCATCGTTGAGGCCGTGGCCCACCACAGACGGGTCCACATCATCGACTACGACATCATGGAAGGGATCCAGTGGGCCTCCCTCATGCAGGCCCTCGCCTCCAACAAAACCGGCCCACCTGGCCCACACCTCCGCATCACCGCATTGTCAAGGACCGGCACTGGACGGAGATCCATCTCCTCCGTTCAAGAGACCGGACGGAGACTAACGGCGTTTGCTGCCTCTTTGGGCCAGCCCTTCTCCTTTCACCAGTGCAGGCTGGACCCCGATGAAACGTTTCGGCCCAACTCCTTGAAGCTTGTTCGCGGAGAGGCCTTGGTCTTCAACTGCATGCTGAACCTTCCGCACCTAATTTACCGCGCGCCCGATTCCGTTGCGTCGTTTTTGAATGCCACGAAATCGCTGAGGCCCACCCTGGTGACGCTGGTGGAAGAAGAGGATGGGCCTGATGGAGGGGACGTTGGGTTTGTGGGCCGATTCATGGACTCGCTGCACCATTACTCAGCGTTTTATGACTCGCTGGAGGCTGGGTTCCCCATGCAGGGCCGGGCGCGGGCTTTGGTGGAGAAGGTTTTTCTTGGGCCGAGGATAGCGGGGTCGTTGGCGCGAATATACCGAACGAGTGGGCAGGATGTGGAGAGGCGGTCGTGGGGGGAATGGTTGGGTGCGGCTGGGTTAAGGGGAGTTCCCGTGAGCTTCGCCAATCACTTGCAAGCGAAGCTGCTTCTGAGTCTCTTCAACGACGGGTATGGGCTTGAGGAATCGGGTCCGAACAAGTTGGTGTTGGGTTGGAGATCACGGCGTTTGCTTTCTGCGTCCGTTTGGACTTGTTCTCCCGATTCTGAGTGA 1560 0.5994 MDINIDMHNNLDFSGYSSATTNTNTPSSDDDPAPCNWNHWSPVVNWDAFAAPHDDFHHLIDSMMDVDSAPLHLTPDAPTSPSTAGEDDEDATTTTTADEPAQPPAPAAKSVDADDTKGLRLVHLLMAAAEALTVPTKSRDLARVILLRLKELVPLATTTAATHASNMERLAAHFTHALHALLDGTGGAHNINNINHKQYNTHVSSTSGSDQTDTVAAFQLLQDMSPYVKFAHFTANQAIVEAVAHHRRVHIIDYDIMEGIQWASLMQALASNKTGPPGPHLRITALSRTGTGRRSISSVQETGRRLTAFAASLGQPFSFHQCRLDPDETFRPNSLKLVRGEALVFNCMLNLPHLIYRAPDSVASFLNATKSLRPTLVTLVEEEDGPDGGDVGFVGRFMDSLHHYSAFYDSLEAGFPMQGRARALVEKVFLGPRIAGSLARIYRTSGQDVERRSWGEWLGAAGLRGVPVSFANHLQAKLLLSLFNDGYGLEESGPNKLVLGWRSRRLLSASVWTCSPDSE* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1376 519 Pfam GRAS domain family 121 513 IPR005202 -
Dod09g1376 519 PANTHER SCARECROW-LIKE PROTEIN 26 6 513 IPR030028 -
Dod09g1376 519 MobiDBLite consensus disorder prediction 75 100 - -
Dod09g1376 519 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 513 IPR005202 -
Dod09g1376 519 MobiDBLite consensus disorder prediction 70 113 - -
Dod09g1376 519 ProSiteProfiles GRAS family profile. 112 513 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1376 Dod-Chr9 35118917 35121396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1376 55 512 GRAS Transcription Factor Family AT1G66350 32.347 1.51e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod09g1376 GRAS 9.9e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1376 - - aip:107608402 676.781