Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1364 ATGGAGGATTTGCAGAGTGCTCTGCAGGATCGTAACTTAACAGTTTCTACCGTCCCAGAAAAGGGTCGTTCTCTCTTTGCAACAAGGGATTTTTACCCTGGGGAGGTAATCATAAGTCAAGAGCCTTACGTTTGTGTTCCAAACAACTCCTCGGCCCAGAAAAGATGTGATGGGTGTTTCACAGCAACTAACCTTAGGAAGTGCTCCCGTTGCCAAGTTGTGTGGTATTGTGGAAGCACATGTCAGAAGTCAGAGTGGAAGTTGCATCGTCTTGAATGTGAGGTCCTCTCTAGGCTGGACAATGGCAAGAGAAAATCCATCACACCATCCATTCGACTGATGGTGAAACTTTATCTTCGAAGGAGGTTGGAAAATGAGAAGATCATCCCAAGCACCGCTATGGACAACTACAACTTGGTGGAGGCATTAGTGGCCCACATGTCTGACATCACTGAGGAGCAGCTGCTGCTGTATGCACAGATGGCTAATCTAGTAAACTTGATTCTACAGTGGCCTGAAATAAATATGAAAGAGATTGCAGAAAATTTTTCCAAGTTTGCATGCAATGCACATACCATTTGTGACAGTGAGTTGAGACCGTTGGGAACAGGATTGTATCCTGTTATTTCCATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGATTTTTGAGGGAAGGTCAGCATCAGTACGTGCTGTGGAACATGTCCCTAAAGGTACTGAGGTACTTATAAGCTATATAGAAACTGCTGGAGGCACTATGACTCGACAGAAAGCTCTCAAAGAACAGTACCTATTCACTTGTAAATGTCCCCGCTGTTCTAAAGTGGGCCAGTATGATGATATCCAAGAAAGTGCAATTCTAGAAGGATACAGATGCAAAAATGAAAAATGTGATGGTTACTTGCTTCGTACTACTGATGGAAAAGGATTCCAATGCCAACAATGTGGATTGGTTAGGGACAAGGAAGAGATGAAGAAAATTGCAACCGAAATAAAATCGCTATCAGAAGAAGAGGCTTCTAAGCTTTCGTCTGCCGGCAATTATCAAGAAGCTATTTCCATATATAAAATGATTGAGAAGCTGCAAACAAAACTCTATCATCCTTTCTCAATCAGCTTGTTGCAAACTCGAGAGAAGATTTTGAAGTCATTGATGGAGCTGGAACACTGGAGTGAAGCTTTAGCATACTGCAAATTGACCATACCAGTCTATCAAAGAGTGTATCCAGCTATTCACCCTCTACTTGGTTTGCAATATTACACTTGTGGTAAACTCGAATGGTATCTAGGAGACACGGTGGAAGCTGTTAAATCACTGACCAAGGCAGTGGATATACTACGGATTACTCATGGGACAAACACACCTTTCATGAAGGAGCTTTTGATGAAGTTGGAAGAAGCACGTGCTGAAGCCTCTCACAAATGTTCCTCTAAAGAGGAGGAGGAGGAGGAATAG 1461 0.4278 MEDLQSALQDRNLTVSTVPEKGRSLFATRDFYPGEVIISQEPYVCVPNNSSAQKRCDGCFTATNLRKCSRCQVVWYCGSTCQKSEWKLHRLECEVLSRLDNGKRKSITPSIRLMVKLYLRRRLENEKIIPSTAMDNYNLVEALVAHMSDITEEQLLLYAQMANLVNLILQWPEINMKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLIFEGRSASVRAVEHVPKGTEVLISYIETAGGTMTRQKALKEQYLFTCKCPRCSKVGQYDDIQESAILEGYRCKNEKCDGYLLRTTDGKGFQCQQCGLVRDKEEMKKIATEIKSLSEEEASKLSSAGNYQEAISIYKMIEKLQTKLYHPFSISLLQTREKILKSLMELEHWSEALAYCKLTIPVYQRVYPAIHPLLGLQYYTCGKLEWYLGDTVEAVKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASHKCSSKEEEEEE* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1364 486 Gene3D Tetratricopeptide repeat domain 402 482 IPR011990 GO:0005515
Dod09g1364 486 Gene3D SET domain 24 274 IPR046341 -
Dod09g1364 486 SMART set_7 11 254 IPR001214 GO:0005515
Dod09g1364 486 Coils Coil 319 339 - -
Dod09g1364 486 SUPERFAMILY TPR-like 341 447 IPR011990 GO:0005515
Dod09g1364 486 Coils Coil 463 486 - -
Dod09g1364 486 Pfam MYND finger 56 93 IPR002893 -
Dod09g1364 486 Gene3D - 106 190 - -
Dod09g1364 486 Pfam SET domain 22 247 IPR001214 GO:0005515
Dod09g1364 486 Gene3D - 55 105 - -
Dod09g1364 486 SUPERFAMILY SET domain 10 252 IPR046341 -
Dod09g1364 486 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Dod09g1364 486 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 473 - -
Dod09g1364 486 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 473 - -
Dod09g1364 486 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Dod09g1364 486 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod09g1364 SET 5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1364 K11426 - gmx:100789518 819.69