Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1357 ATGGCGGCTTCCGTCGATAACCGTCAATACCCAGGCCTCCAAGTCCCGCCTCCCATAAACGGCGTCGTACGCACTTTCAAGCCCCCTTCCAACCGCCGCTCCGACTCCCCCATCCGCCGTTACAACAACCTCCCGCAAAACCCGGACTTCACGCGCCCCAAGAAGTCCCCTGACTCCCCATTCCACGTCGACAACGCCTCCTCCTCTTCCGACGACGATGACGAAAAGGAAAATTTAAAAGCCCTCATTAGAAAAGGAACCGCCGAACTCGAACCCTCAATCAACGATCCGCGCGACGACGGAACCTCCGACCACTGGGTCCAGCGTAACGCCTCCATGGTCCGCCTCACAGGGAAGCACCCCTTCAACTCTGAGCCACCACTCCCTCGGCTCATGCACCACGGTTTCATAACCCCTGTTCCAATCCACTACGTCCGCAACCACGGGCCCGTGCCCAAGGCCCGCTGGGAGGACTGGACCGTTGAGGTATGCGGGCTCGTGAAGCGGCCCGCCAAGTTCACCTTGGACCAGCTTATCCGCGAGTTCCCGAGCCGAGAGTTCCCGGCCACGCTCGTTTGCGCAGGGAACCGCCGCAAGGAGCAGAACATGGTGAAGCAGAGCATCGGGTTCAACTGGGGGGCAGCGGCGGTTTCCACGTCGGTGTGGAAGGGCGTGCCTTTGAGGAGCGTTCTGAAGCGGTGCGGTATCTTTGGGCGCACTAAAGGTGCCCTCCACGTGTGCTTCGAAGGCGCTGAGGACCTGCCAGGTGGCGGTGGATGCAAGTACGGGACGAGTATCCTGAGGGAGGTTGCACTGGATCCCGCCCGCGACATCATACTCGCTTACATGCAAAACGGGGAGCGTTTAACCCCTGATCACGGGTTCCCCGTGCGCATGATCATTCCCGGGTTCATAGGTGGCCGCATGGTGAAGTGGTTGAAACGCATCGTCGTAACTACCCAGCAATCTGACAGTTACTACCACTACAGGGATAACAAGGTGCTACCCTCCCACGTCGATGCCGAGCTTGCCAAGGCTGAAGCTTGGTGGTACAAGCCAGAGTATACGATCAATGAGCTGAACATAAACTCGGTGATAACGACGCCGTGCCATGATGAGATCTTGCCCATTAACTCATGGACTACTCAGAGGCCTTATATGCTCAGGGGCTACGCGTATTCTGGGGGCGGGAGAAAGGTGACACGTGTTGAAGTGACAATGGACGGTGGTGACACGTGGCAAGTGTGCACCTTGGACCATCCAGAGAAGCCCAACAAGTACGGTAAGTACTGGTGTTGGTGCTTCTGGTCCTTGGAGGTGGAGGTGCTAGACCTGCTTGGAGCCAAGGAAATCGCGGTGCGTGCCTGGGACGAGGCCCTCAACACTCAGCCTGAGAAGCTCATCTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGAGTGAAAACCAACGTGTGCAAGGCCCACAAGGGCGAGATTGGCATAGCGTTTGAGCACCCGACTCAACCAGGAAACCAATCCGGTGGCTGGATGGCCAAAGAAAGGCACCTCGAGAAATCATCAGATTCCAACGCAACCCTCAAGAAGAGTGTCTCCTCACCCTTCATGAACACCAGCTCAAAGATGTTCTCCATGGCCGAAGTCAAGAAGCACAGCAGCCCCGATTCGGCGTGGATCATCGTCCACGGCCACGTCTACGACTGCACGCCCTTCCTCAAGGACCACCCTGGCGGCACCGACAGCATCCTCATCAACGCAGGCACCGACTGTACGGAAGAGTTCGACGCCATCCACTCCGACAAAGCCAAGAAAATGCTCGAAGAATACCGAATCGGCGAGCTCATCACCACAGGCTACACCTCCTCCTCTGATTCCTCACCCAACAACTCCGTGCATGGAAACTCCGAAACCACCCATTTGGCCCCCATCAAGGAAGTTACACCACTGCGCAGCGTGGCTCTCAACCCACGTGAGAAAATCCCATGCAAGCTCGTGTCCAAAACGTCCCTCTCCCACGACGTTAGGCTCTTCCGGTTCGCATTGCCCTCCGAGGACCAGCTCCTGGGTCTCCCAGTCGGGAAGCACATATTCGTGTGTGCCACCATCGACGAGAAGCTTTGCATGCGTGCTTACACTCCATCAAGTTGCGTTGATGTAGTTGGGTACTTCGAACTAGTTGTCAAGATTTACTTCAAAGGAGTGCACCCAAAGTTCCCTAACGGTGGACTCATGACTCAGCACTTGGACTCGCTCCCCATTGGCTCTGTCTTGGACGTGAAAGGTCCATTGGGGCACATAGAATACACTGGCAAAGGGAACTTTCTAGTTCACGGGAAACCCAGGTTTGCGAAGAGGCTAGCCATGCTGGCTGGTGGCACTGGAATCACACCCATTTACCAAGTGGCCCAAGCAATTCTGAAGGACCCAGAGGACCGCACCGAGATGCTCGTCGTGTACGCGAACCGGACTGAGGATGATATTTTGCTGAGGGAAGAGATGGATGCTTGGGCTAAGAGCGATGAAAGGTTCAAGGTGTGGTACGTGGTAGAGAACAAGAGAGAAGGGTGGGAATACAGTGTGGGGTTCATCACGGAGTGTATCATGAGGGAGCATCTTCCTTCGGCATCCGAGGACACGTTAGCATTGACTTGTGGGCCACCACCCATGATTCAGTTTGCAGTGCAGCCGAATTTGGAGAAGATGGGCTATGACATCAAGAACAACTTGCTCGTGTTTTAG 2742 0.558 MAASVDNRQYPGLQVPPPINGVVRTFKPPSNRRSDSPIRRYNNLPQNPDFTRPKKSPDSPFHVDNASSSSDDDDEKENLKALIRKGTAELEPSINDPRDDGTSDHWVQRNASMVRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGPVPKARWEDWTVEVCGLVKRPAKFTLDQLIREFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAVSTSVWKGVPLRSVLKRCGIFGRTKGALHVCFEGAEDLPGGGGCKYGTSILREVALDPARDIILAYMQNGERLTPDHGFPVRMIIPGFIGGRMVKWLKRIVVTTQQSDSYYHYRDNKVLPSHVDAELAKAEAWWYKPEYTINELNINSVITTPCHDEILPINSWTTQRPYMLRGYAYSGGGRKVTRVEVTMDGGDTWQVCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQPEKLIWNVMGMMNNCWFRVKTNVCKAHKGEIGIAFEHPTQPGNQSGGWMAKERHLEKSSDSNATLKKSVSSPFMNTSSKMFSMAEVKKHSSPDSAWIIVHGHVYDCTPFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKMLEEYRIGELITTGYTSSSDSSPNNSVHGNSETTHLAPIKEVTPLRSVALNPREKIPCKLVSKTSLSHDVRLFRFALPSEDQLLGLPVGKHIFVCATIDEKLCMRAYTPSSCVDVVGYFELVVKIYFKGVHPKFPNGGLMTQHLDSLPIGSVLDVKGPLGHIEYTGKGNFLVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMLVVYANRTEDDILLREEMDAWAKSDERFKVWYVVENKREGWEYSVGFITECIMREHLPSASEDTLALTCGPPPMIQFAVQPNLEKMGYDIKNNLLVF* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1357 913 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 541 616 IPR001199 -
Dod09g1357 913 Pfam Cytochrome b5-like Heme/Steroid binding domain 546 615 IPR001199 -
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 114 128 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 273 289 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 136 152 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 402 414 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 388 402 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 454 466 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 306 319 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 357 369 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 429 439 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 467 480 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 215 230 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 290 303 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 189 200 IPR008335 GO:0016491
Dod09g1357 913 PRINTS Eukaryotic molybdopterin domain signature 200 212 IPR008335 GO:0016491
Dod09g1357 913 Gene3D - 765 913 IPR039261 -
Dod09g1357 913 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 757 907 IPR039261 -
Dod09g1357 913 Pfam Oxidoreductase NAD-binding domain 789 895 IPR001433 GO:0016491
Dod09g1357 913 PANTHER NADH-CYTOCHROME B5 REDUCTASE 74 913 IPR001834 GO:0016491
Dod09g1357 913 PIRSF Nitr_rd_NADH 31 912 IPR012137 GO:0006809|GO:0042128|GO:0050464
Dod09g1357 913 SMART Cyt_b5_2 544 616 IPR001199 -
Dod09g1357 913 Gene3D Translation factors 650 764 - -
Dod09g1357 913 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 98 357 IPR036374 -
Dod09g1357 913 MobiDBLite consensus disorder prediction 67 84 - -
Dod09g1357 913 MobiDBLite consensus disorder prediction 1 104 - -
Dod09g1357 913 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 165 200 IPR022407 GO:0043546
Dod09g1357 913 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 539 619 IPR036400 -
Dod09g1357 913 Gene3D - 359 534 - -
Dod09g1357 913 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 572 579 IPR018506 GO:0020037
Dod09g1357 913 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 658 770 IPR017927 GO:0016491
Dod09g1357 913 MobiDBLite consensus disorder prediction 27 53 - -
Dod09g1357 913 Gene3D - 537 618 IPR036400 -
Dod09g1357 913 SUPERFAMILY E set domains 359 486 IPR014756 -
Dod09g1357 913 Pfam Oxidoreductase molybdopterin binding domain 148 327 IPR000572 -
Dod09g1357 913 Pfam Oxidoreductase FAD-binding domain 663 769 IPR008333 -
Dod09g1357 913 Pfam Mo-co oxidoreductase dimerisation domain 355 486 IPR005066 GO:0016491|GO:0030151
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 881 889 - -
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 755 769 - -
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 689 700 - -
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 710 717 - -
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 826 837 - -
Dod09g1357 913 PRINTS Cytochrome B5 reductase signature 788 807 - -
Dod09g1357 913 Gene3D - 118 358 IPR036374 -
Dod09g1357 913 SUPERFAMILY Riboflavin synthase domain-like 652 771 IPR017938 -
Dod09g1357 913 CDD cyt_b5_reduct_like 663 913 - -
Dod09g1357 913 PANTHER NITRATE REDUCTASE 74 913 - -
Dod09g1357 913 CDD eukary_NR_Moco 99 484 - -
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 788 807 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 710 717 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 881 889 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 857 873 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 814 823 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 575 585 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 826 837 IPR001709 GO:0016491
Dod09g1357 913 PRINTS Cytochrome B5 signature 576 590 IPR001199 -
Dod09g1357 913 PRINTS Cytochrome B5 signature 603 615 IPR001199 -
Dod09g1357 913 PRINTS Cytochrome B5 signature 566 576 IPR001199 -
Dod09g1357 913 PRINTS Cytochrome B5 signature 591 598 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1357 Dod-Chr9 34832322 34838258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1357 651 904 NADPH P450 reductases AT5G17770 40.078 4.20e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1357 K10534 - gmx:732634 1545.41