Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1354 ATGGATAGGCCTCGTTTTTTCAGTCCTAGAAACCAACCAACCACCGCCATGGATCCCAAGAAAATCCGCAGGAAGCCCAAGCTCGAGCGCCGCAATGCCCTCAAGTACTCCGACTACGACGCCGGCGGCAGCTGCGGCGGCTCCACCTCCTCCTCCTCAATTGACGACTCATCTTCCGGCGGCGGCGGAGGAGCCTCCCTCTACACCCGATCCATGGAGTTCTACGACCGAACCAGCTTCCGAATCGAGGGAACCGAGGGCGAGTTCGACCGGATTTGCCGGAGCTTGGGCCTCTCAGGCCCCGAAGACTTCGCCATCCCCGCGGCTGCATGGGAGGCCATGAAGGTCCGCTCATCTTCCGATATTCTCCCCACGCTGAAGCTCGGAGGGCTCGAGGAAGGTCATGAGGAGAGGGAAGATGAAGAAGTGGAGCGAAACGACGTCGCGGAGCGTGGACGGGGCGAGAAATATGATGATAGGGTTAGGGTTACAGACGAAGCAGCTGAGACTAGCTGTGGAGGGATCAAGGGAGCTCGTCCACCGATGCTTAAGCCGCCGCCGGGGGCTAGGGTTCCGGTGGTGGACGACGACACGTGCTCCACGTGGGACCTTCTGAAGGACTTTGCTCCGCAAGGTGAAGTCCACTCGTTGAACGAGTCAGAGGATGAACACGGAGAACCAGAGAAAGAAGAAGAAGAAGAAGAAGCAAAAGGAGAGGAAGAAGTAGTAGAAGAAAAAGGAGAAGAAGAAGTGGTAGTAGTAGAAGAAAGTGGTGGTGGTGGGGTGAGTCCGAAGAGAGAAGAGGAAGAAGGGGTGGATGATAATGCGGCGATGATGGCGGAGATTGTTGCGGAGCTTTCAGGGTGTTCGTTTAGCACTTCGAATGATGAAGATGATACTTCGAGCACTACAACGGGTCCTAGGTCTAATAATATATCTCCTAATGGCAGAATTAAGCGTATTATTACCACCGGGGACTGGCAAAAGGGTGATCTTCTTGGCCGTGGTACCTTTGGCTCTGTCTTCGAAGGAATTTCTGGCGATGGATTCTTTTTCGCTGTGAAAGAAGTTTCACTGCTTGATCAAGGTAATCAGGGAAAGCAAAGCGTCTATTATCTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACTATGGAACAGAAATGGATGAATCAAATCTGTATATCTTTCTTGAGCTTGTAACAAAAGGTTCTCTTCAAAGTCTCTACCGCAGGTATACACTTCGAGATTCCCAAGTATCTGCCTACACAAGACAGATTCTGCATGGGTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATTAAATGTGCCAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCCGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCATGCCAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTAAAAGGAAAGAACCGAGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTGCTGGAGATGTTGACGGGCCAAAAGCCATACTATGAGTTAGAATACATGCAGGCATTATTTAGAATTGGAAAAGGTGAGCTACCTCCTGTTCCAGATTCTCTTTCAAGTGATGCCCGGGACTTTATCCTGCAGTGCCTTCAAGTTAATCCAGACAAACGTCCCACTGCTGCTGAACTCTTAAACCATCCATTTGTCCAAAGGCCACTTTCCCAATCCTCTGGTTCTTCATTTCCTAACATTCCTGGCAGAAAGGGTTGA 1803 0.4986 MDRPRFFSPRNQPTTAMDPKKIRRKPKLERRNALKYSDYDAGGSCGGSTSSSSIDDSSSGGGGGASLYTRSMEFYDRTSFRIEGTEGEFDRICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPTLKLGGLEEGHEEREDEEVERNDVAERGRGEKYDDRVRVTDEAAETSCGGIKGARPPMLKPPPGARVPVVDDDTCSTWDLLKDFAPQGEVHSLNESEDEHGEPEKEEEEEEAKGEEEVVEEKGEEEVVVVEESGGGGVSPKREEEEGVDDNAAMMAEIVAELSGCSFSTSNDEDDTSSTTTGPRSNNISPNGRIKRIITTGDWQKGDLLGRGTFGSVFEGISGDGFFFAVKEVSLLDQGNQGKQSVYYLEQEIALLSQFEHENIVQYYGTEMDESNLYIFLELVTKGSLQSLYRRYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSCQGTAFWMAPEVVKGKNRGYGLPADMWSLGCTVLEMLTGQKPYYELEYMQALFRIGKGELPPVPDSLSSDARDFILQCLQVNPDKRPTAAELLNHPFVQRPLSQSSGSSFPNIPGRKG* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1354 600 MobiDBLite consensus disorder prediction 224 251 - -
Dod09g1354 600 MobiDBLite consensus disorder prediction 132 191 - -
Dod09g1354 600 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Dod09g1354 600 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 75 593 - -
Dod09g1354 600 MobiDBLite consensus disorder prediction 141 166 - -
Dod09g1354 600 MobiDBLite consensus disorder prediction 1 68 - -
Dod09g1354 600 SMART serkin_6 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1354 600 SUPERFAMILY Protein kinase-like (PK-like) 314 584 IPR011009 -
Dod09g1354 600 Gene3D Transferase(Phosphotransferase) domain 1 324 594 - -
Dod09g1354 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Dod09g1354 600 MobiDBLite consensus disorder prediction 43 65 - -
Dod09g1354 600 ProSiteProfiles Protein kinase domain profile. 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1354 600 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Dod09g1354 600 PRINTS Tyrosine kinase catalytic domain signature 405 418 IPR001245 GO:0004672|GO:0006468
Dod09g1354 600 PRINTS Tyrosine kinase catalytic domain signature 440 458 IPR001245 GO:0004672|GO:0006468
Dod09g1354 600 PRINTS Tyrosine kinase catalytic domain signature 549 571 IPR001245 GO:0004672|GO:0006468
Dod09g1354 600 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 75 593 - -
Dod09g1354 600 MobiDBLite consensus disorder prediction 289 317 - -
Dod09g1354 600 Pfam Protein kinase domain 328 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1354 600 MobiDBLite consensus disorder prediction 210 272 - -
Dod09g1354 600 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1354 Dod-Chr9 34798501 34805793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1354 289 584 MAP Kinase Kinase Kinase AT4G08500 69.697 7.97e-139 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod09g1354 Pkinase 3.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1354 K13414 - gmx:100819999 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1318 08 19630644 19638661 Dod09g1354 09 34798501 34805793 PCT