Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1340 ATGAGCAATTTGAGAATCGTGTGCAGGCCTCAAACGGTGTTCTGTTTCATTAGTTGCAGACACCAATTTCGAACCAGAGCTTCGTTTCGAAACCCTAATTTCAAACCCCGTTTGCTTTCACCCTCTCTGTATTCTACGTGGCTCGGTCCCTGTGGTTCGAGAAGGAACCAGCCCTGGTTTCGTGTGAATCAGAGGAGAACTGTGGCGAACGCTTCAAATTGGGACGAAACAAAATCCCCATATGAAACTCTTGAATTGGACAGAGATGCTGATGAGGAGCAGATAAAGAGTGCTTATAGACGATTGGCTAAATCCTATCATCCGGATGTCTATGATGGTAGAGGAACCCTTGAGGAAGGGGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGAAGAGAGGCGTAGAAAGTATGATATGGATAACCGAGTCAACCCTATGAAGGCATCTGAGGCATGGATGGAGTGGCTAATGAAAAAGCGAAAAGCTTTTGATCAGCGTGGTGATATGGCAGTTGCTGCTTGGGCTGAGCAGCAGCAACGAGAAATGAACATTCGTGTTCGTCAACTTTCTCGTTCAAAGATTGATCCTGATGAGGCAAGGAAGATCTTGGCTAGAGAAAAGAAGGCTTCTGCTGAATATTTCTCCAATACCCTTAAAAGGCACACGCTTGTGCTGAAAAAAAGAGATTTGATGCGGAGAAAGGCTGAGGAAGAAAAGAAGAAAACTATTAGCCATCTCTTAGCAGCAGAAGGTCTTGATCTTGAGTCAGATAGTGATGAGTCGCTGTAG 816 0.4436 MSNLRIVCRPQTVFCFISCRHQFRTRASFRNPNFKPRLLSPSLYSTWLGPCGSRRNQPWFRVNQRRTVANASNWDETKSPYETLELDRDADEEQIKSAYRRLAKSYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDEERRRKYDMDNRVNPMKASEAWMEWLMKKRKAFDQRGDMAVAAWAEQQQREMNIRVRQLSRSKIDPDEARKILAREKKASAEYFSNTLKRHTLVLKKRDLMRRKAEEEKKKTISHLLAAEGLDLESDSDESL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1340 271 Coils Coil 81 101 - -
Dod09g1340 271 CDD DnaJ 80 139 IPR001623 -
Dod09g1340 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Dod09g1340 271 PRINTS DnaJ domain signature 168 187 IPR001623 -
Dod09g1340 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Dod09g1340 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Dod09g1340 271 Pfam DnaJ domain 80 147 IPR001623 -
Dod09g1340 271 PANTHER CO-CHAPERONE PROTEIN DJLA 53 268 - -
Dod09g1340 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Dod09g1340 271 SMART dnaj_3 78 142 IPR001623 -
Dod09g1340 271 Gene3D DnaJ domain 67 165 IPR036869 -
Dod09g1340 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Dod09g1340 271 SUPERFAMILY Chaperone J-domain 74 148 IPR036869 -
Dod09g1340 271 PANTHER LD30543P 53 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1340 Dod-Chr9 34659583 34663436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1340 71 147 C2H2 Transcription Factor Family AT1G74250 37.662 5.48e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1340 - - gmx:100808285 447.203