Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1339 ATGGACATATTTGAGCCATTCCAGCAAGTTAGCATGTGGGGGGATAGCTTTAAGGTTGATGGTGGCCTGAATTCAATTACTTCCCCAATGTTACTGGTGAGCAATAGCATGGATACCAAGTCAGAATATATTCCTCCTCATGAATTAAGGGAACCTTCCAGAGACAATCAAGGGACTATGAATAAAGATGTTAGTAAGGTGTTAAGACGCCTAGCTCAGAATCGAGAAGCTGCTAAGAAAAGTCGGCTTCGGAAGAAGGCTTATGTTCAACAATTAGAAAGTAGCCGTTTGAAGCTCATGCAATTGGAGCTGGAGATTGGGAAAGCAAGGAAGCAGGGTTTGAACTTTGGCAGTGCATCAGATGCTAGCTATATGGGATCATCTGGACCAATAAACTCAGGGATTGTTTCATTCGAAACTGAATATGGACATTGGATTGATGAGCTAAATAAGCGGAATGAAGAACTTAGAAATGCATTTCAAACTCAGGCACATGATGTGCAACTCCAACTACATGTTCAGAGCGTCTTGAACCATTACTCAGATCTTTTCAGAATTAAAGCAGAAGCTGCAAAGGCTGATATCTTCTATTTGATCAGTGGTGTATGGAAATCATCAGTAGAACGCCTTTTCCTCTGGATTGGAGGATCCCGCCCTTCACAGCTTGTAGATATCATTGTGCCACAACTTGGCCCTTTGACTGATCAACAAAATGCTAGCATCAACACCCTCCGGCAATCATCTCAGCAAGCTGAAGATGCTCTTTCACAAGGATTGGATAAACTCCAGCAGGGCCTTGTCCACAACATAGCACTTGATCCTTTGGTTGCAGGAAACCTTGGGTTTCAGATATCTGTTGCCATGGAGAAAACTGAGGCACTAGAAGGCTTCCTAAACCAGGCAGATCACCTGAGGCAACAGACCTTGATGCACATGTCTCGCATCCTGACAACACAGCAAGCTGCACAGGGCTTGGTGGCACTGGGTGCATACTTTCACCGACTTCGTTCTCTTAGTTCTCTTTGGGCCACTCGTCCTTGTGATCCTCTCTAG 1053 0.4454 MDIFEPFQQVSMWGDSFKVDGGLNSITSPMLLVSNSMDTKSEYIPPHELREPSRDNQGTMNKDVSKVLRRLAQNREAAKKSRLRKKAYVQQLESSRLKLMQLELEIGKARKQGLNFGSASDASYMGSSGPINSGIVSFETEYGHWIDELNKRNEELRNAFQTQAHDVQLQLHVQSVLNHYSDLFRIKAEAAKADIFYLISGVWKSSVERLFLWIGGSRPSQLVDIIVPQLGPLTDQQNASINTLRQSSQQAEDALSQGLDKLQQGLVHNIALDPLVAGNLGFQISVAMEKTEALEGFLNQADHLRQQTLMHMSRILTTQQAAQGLVALGAYFHRLRSLSSLWATRPCDPL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1339 350 Pfam bZIP transcription factor 66 94 IPR004827 GO:0003700|GO:0006355
Dod09g1339 350 Gene3D - 65 115 - -
Dod09g1339 350 Pfam Seed dormancy control 154 227 IPR025422 GO:0006351|GO:0043565
Dod09g1339 350 Coils Coil 146 166 - -
Dod09g1339 350 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 347 - -
Dod09g1339 350 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Dod09g1339 350 SUPERFAMILY Leucine zipper domain 66 99 IPR046347 GO:0003700|GO:0006355
Dod09g1339 350 SMART brlzneu 62 122 IPR004827 GO:0003700|GO:0006355
Dod09g1339 350 PANTHER TRANSCRIPTION FACTOR TGA9 1 347 - -
Dod09g1339 350 Coils Coil 85 112 - -
Dod09g1339 350 ProSiteProfiles DOG1 domain profile. 135 345 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1339 Dod-Chr9 34653922 34659320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1339 1 346 Calmodulin-binding Proteins AT1G22070 54.270 4.60e-131 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod09g1339 DOG1 7.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1339 K14431 - gmx:100794268 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1304 08 19237436 19242063 Dod09g1339 09 34653922 34659320 PCT