Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1328 ATGTCTTCGTCATCATCGTCGAATTCTCCGTGTGCGGCATGCAAGATTCAGCGGAGGAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTATTTTCCGCCGGACAACCCGCAGAGGTTCGCGTACGTGCACAAGGTGTTCGGTGCAAGCAACGTCGCAAAGCTCCTCAACGACCTCAACGCGGCGCAGCGTGAGGATGCAGTGAAGTCCCTCGCATACGAGGCGGAGGCGCGTCTGCGTGACCCCGTGTACGGGTGCGTGGGGCTCATCTCCCTCCTCCAGCACAAGCTCAAGCAGTTACAGGCCGAGCTCAACAACGCCAAGAACGAACTCGCCAACTACATCGGCCCCCACTCCGTCCTCCCCCTCCTCCAACCGCCTCAACTCCCCAGTAACAACCACAACAGCAACAGTAACGGCAATTTTTCTGTTATTCCGTTACGGGCCGTGAATCCCGGGATGCCGGTTCAAGAGGTTATGAACCAGCAGGAGGTTTTGAGGCTCGGCGGGTTCGAGGGTGGAGGGTCGGGTTCGCTGAGTGGGTTCAATAATCATCATATGGTTGCTGGTTCTGTGGTTTCGCCTTCGATGGCTCTGTGCCCAGTGGATCATCACTCTTCTTATCAGCATTATCCTGTCCAGGTGCATCAGTCTCTAGCGTTAGAGAAGCAGCCCAAGTCGGGGAGCATGGACGGTAGGACTAGCAGGAGCACAGGTCCTTCTTGCTGTTGA 729 0.5706 MSSSSSSNSPCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNDLNAAQREDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLKQLQAELNNAKNELANYIGPHSVLPLLQPPQLPSNNHNSNSNGNFSVIPLRAVNPGMPVQEVMNQQEVLRLGGFEGGGSGSLSGFNNHHMVAGSVVSPSMALCPVDHHSSYQHYPVQVHQSLALEKQPKSGSMDGRTSRSTGPSCC* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1328 242 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Dod09g1328 242 MobiDBLite consensus disorder prediction 221 242 - -
Dod09g1328 242 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Dod09g1328 242 Coils Coil 89 116 - -
Dod09g1328 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 5 149 - -
Dod09g1328 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1328 Dod-Chr9 34562372 34564632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1328 5 152 AS2 family AT5G66870 64.968 9.30e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod09g1328 LOB 2.2e-42 No_clan