Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1314 ATGGCAGCTATGATGGATTTCTACAACAGCACCCAACTTCACTCAGATCCCTTCAGGGGTGAGCTAATGGAAGCTCTTGAACCTTTCATGAAGAGTCCTTCCACAACCCCTTCTCCTTCTCCTTCTCCTCCTCCCTCTACAGCCTCATCTCCTTCTTCAACTTCATCTCTACCTTCTACTTCTTACCCTCCTCTCCCAACCTTCTACCACTCCTCTCCTTCATCACTCCCTGCTCAACCCACTTTCTACCCCGATGGTTGTTGCCCGACATTGATGACCCATCTATTTGCAAACGGGTCATCCGACAGCCAAAACCTCTTCGGCTTCGGGCACCCAACTTCCCTTCTCGGCCTCAACCACCTAACCCCGTCCCAGATCAACCAGATCCAGGCCCAGATCCAGCTCCAGGCCCAGGCCCAGGCCCAACCATGGCAGCAGCACAGCCACCACAACACAACCCTCAGCTTCCTCGGGCCTAAGCCCATCCCCATGAAGCACGTGGGGGCTCCATCAAAGCCCACGAAGCTGTACAGAGGGGTGAGGCAGAGGCACTGGGGGAAGTGGGTCGCCGAGATCAGACTCCCAAAGAACCGTACGAGGCTCTGGCTCGGCACCTTTGACACTGCCGAGGAAGCTGCTTTGGCGTACGACAAGGCCGCTTACAAGCTCCGAGGTGACTTCGCAAGGCTCAACTTCCCCAACCTCCGACATCAAGGTTCCTCTGTTGGGGGAGACTTCGGAGAGTACAAGCCTCTTCACTCCGCTGTTGACGCCAAGCTTCAGGCCATATGCGAAGGCCTGGCTGAGATGCAGAAGCAGGGGAAGTCCGACAAGGCTACGGCGTCCTCTAAGAGGTCACCTGCGGGGCGATCGAAACAAGGTTCCAAGGTTGCTCAGCCTAAGCCAGAGGCTGTAGCCCCCAAGGTTGCCGACGATGTCAAGGGGTTGGAGAATTCTTGCAAGGTCGAAGCTGCTTCGTCTCCGGTGATGGCAGAGAGTGAGGGATTTGAGAATTCCTCGCCTCTTTCGGATCTGACCTTTGCTGATGATGTCGGTGAGCCACACTGGGAGGGTGCTTCGGATAATTTTAATCTTCTCAAGTACCCTTCTTATGAGATCGATTGGGATTCTCTGTGA 1137 0.5523 MAAMMDFYNSTQLHSDPFRGELMEALEPFMKSPSTTPSPSPSPPPSTASSPSSTSSLPSTSYPPLPTFYHSSPSSLPAQPTFYPDGCCPTLMTHLFANGSSDSQNLFGFGHPTSLLGLNHLTPSQINQIQAQIQLQAQAQAQPWQQHSHHNTTLSFLGPKPIPMKHVGAPSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSAVDAKLQAICEGLAEMQKQGKSDKATASSKRSPAGRSKQGSKVAQPKPEAVAPKVADDVKGLENSCKVEAASSPVMAESEGFENSSPLSDLTFADDVGEPHWEGASDNFNLLKYPSYEIDWDSL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1314 378 MobiDBLite consensus disorder prediction 326 345 - -
Dod09g1314 378 MobiDBLite consensus disorder prediction 29 61 - -
Dod09g1314 378 MobiDBLite consensus disorder prediction 271 307 - -
Dod09g1314 378 Pfam AP2 domain 177 225 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 ProSiteProfiles AP2/ERF domain profile. 176 233 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 377 - -
Dod09g1314 378 Gene3D AP2/ERF domain 176 234 IPR036955 GO:0003700|GO:0006355
Dod09g1314 378 CDD AP2 175 235 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 PRINTS Ethylene responsive element binding protein signature 177 188 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 PRINTS Ethylene responsive element binding protein signature 199 215 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 4 377 - -
Dod09g1314 378 MobiDBLite consensus disorder prediction 34 48 - -
Dod09g1314 378 SMART rav1_2 176 239 IPR001471 GO:0003700|GO:0006355
Dod09g1314 378 MobiDBLite consensus disorder prediction 275 293 - -
Dod09g1314 378 SUPERFAMILY DNA-binding domain 176 234 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1314 Dod-Chr9 34314048 34316138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1314 1 378 AP2-EREBP Transcription Factor Family AT1G78080 50.900 2.51e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod09g1314 AP2 8.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1314 K09286 - gmx:732559 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1282 08 18466784 18468563 Dod09g1314 09 34314048 34316138 PCT