Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1296 ATGGCTAAGTTATGCTGTTTTAAGGCTTCCTACTCTCAGCTTGTAGCCTCACGTTCTTCATCCAGCACTGGTAAGGGGAAAAATCATGAAGGTTCAATAAAGTATGGTTTCAGCCTAGTGAAAGGGAAAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATAAAGGACAACGAATTGGGCTTGTTTGCTATATATGATGGCCACCTTGGAGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATCTTAAGGGAGGAAGAGTTTTGGGACGACCCTACTCTATCTATCTCAAAGGCATATGAGAGCACAGATCAGGCAATTCTATCACACAGTGCTGATTTGGGGCGTGGTGGATCAACGGCAGTAACTGCAATATTGATCAATGGACGCAGGTTGTGGATAGCTAACGTTGGAGATTCACGAGCTGTTCTTTCAAAAAAAGGTCAAGAAGCATTACAAATGACAATAGATCATGAGCCTAACACAGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCCAACTTGCCAGGTGATGTGCCTAGAGTAAATGGTCAACTGGCTGTTTCTCGAGCATTTGGAGACAAGAGCCTCAAATCACATTTGAGATCGGACCCTGATGTGAAGAGTGTTGATATAGATGCTGATACTGATATTCTAATACTTGCAAGTGATGGACTCTGGAAGGTAATGACTAATCAAGAGGCAGTGGATATTGCTAGAAAGATGAGAGATCCACAGAAAGCAGCTAAGCAATTAACAGCTGAAGCCTTGAAGAGAGACAGTAAAGATGATATATCTTGCGTTGTGGTTAGATTCAAGTCTTGA 855 0.4246 MAKLCCFKASYSQLVASRSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFVQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWDDPTLSISKAYESTDQAILSHSADLGRGGSTAVTAILINGRRLWIANVGDSRAVLSKKGQEALQMTIDHEPNTERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVKSVDIDADTDILILASDGLWKVMTNQEAVDIARKMRDPQKAAKQLTAEALKRDSKDDISCVVVRFKS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1296 284 ProSiteProfiles PPM-type phosphatase domain profile. 34 282 IPR001932 -
Dod09g1296 284 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 2 283 - -
Dod09g1296 284 CDD PP2Cc 33 282 IPR001932 -
Dod09g1296 284 SMART PP2C_SIG_2 45 282 IPR001932 -
Dod09g1296 284 Pfam Protein phosphatase 2C 43 275 IPR001932 -
Dod09g1296 284 PANTHER PROTEIN PHOSPHATASE 2C 2 283 IPR015655 GO:0004722|GO:0006470
Dod09g1296 284 Gene3D - 29 284 IPR036457 -
Dod09g1296 284 SUPERFAMILY PP2C-like 32 283 IPR036457 -
Dod09g1296 284 SMART PP2C_4 30 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1296 Dod-Chr9 34069487 34073292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1296 1 283 PP2C-type Phosphatase Gene Family AT1G22280 73.702 6.90e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1296 K17506 - gmx:100797292 517.309