Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1280 ATGGAGAATTCTGAAGCTGCGGCGGCTCAGAGAGATCGCAGGGCAGATGCTCTGGGAAACCTTCGGGTCCTTCCCGATGAAACCCTCTGCGCAATCTTGGAGTATCTCACTCCCCGAGATGCTGCTCGCCTTGCTTGCGTTAGCAGTGTGATGTACATATTGTGCAATGAAGAACCACTGTGGATAAGTCTATGCCTTAAAAGAGCATCTGGTTTGCTTCGCTACCAAGGCTCTTGGAAGAAAACTGCCCTGTATAATGAGGATCTGCCAGACAAATACAAAGAGTGCCAAGGACGGTCATTATATTTTGATGGGTTCAACTCTTTATTTTTGTATAGGAGATTGTACAGGTGTCATGCCACATTGGAAGCATTTCATGCAGATAATGGAAGTGTGGAAAGAATCAAAGACATCTCTTTGAAGGATTTCTATGACCAGTATGATGCGAAGAAACCGGTTATGCTTACTGGATTGGCTGATACATGGCCTGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATGTAGCATTTAAACTTTCTCAAAGGAGTTCCCAGAAGATCTCCATGAAGCTCAAGGATTATGTCTCATACATGAAAGTTCAGCATGATGAAGATCCCTTATATATTTTTGATGAAAAGTTTGGCGAAGTTGCACCAAGCTTATTGAAGGATTATTCTGTGCCTCATCTTTTCCAAGAAGACTTCTTTGATAACTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTTACCAGTGCATGGAATACTCTTCTTTATGGCCGTAAAAGGTGGGCATTATATCCTCCGGGAAAGGTGCCTTTGGGTGTGACAGTGCATGTTAATGAAGAAGATGGTGATGTCAATGTTGAGACTCCATCATCTCTACAGTGGTGGCTAGACTTCTATCCTCTTCTTGCTGATGAAGACAAGCCAATTGAGTGCACACAACTACCTGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTTTTAAATTTGGAAGCAAGTATTGCTGTCACACAGAATTTTGTGAATTCCAATAACTTCGAATTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTCTGTCGTGCTGGATTGCTTGCTCTGGATGAAGATACTTATGAAAATGTCATACGAAACATGTCATGTAATGGGAAAAACTTAAGTTATTCTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTAACAAAGATGTAGTTGATCTGAATCACGAAAGTAACTTAAGTGGTGCATCTAGAAGCTATGAATTATGGAAAGATGGATTTTCCTATGATATAAATTTCTTATCCATGTTTTTGGATAGAGATAGGGACCACTACAGTTCGCTGTGGTGCTCAAGCAACAGCATTGGTCAACGAGAGCTAAGAGAATGGTTATCCAAACTTTGGATTCAAAAACCAGAAATGAGAGAGCTAATATGGAAGGGAGCATGTGTTGCACTAAATGCTGACAAGTGGTTAGAATGCCTATCAAAAATTTGTGCTGTCCACAATTTGTCCCTTCCCACTGATGATGAAAGGCTTCCAGTTGGCGCCGGTAGCAATCCTGTTTATATTGTGGGAAACTCCGTTGTTAAGATTCTTGTCGAAAGAGGATTGGAAGCTTCACTTTATGGTTTAGGCACAGAGCTAGGGTTTTACAGTATACTGCATGAAACCAACTCCTCTCTCAAGAAACATATTCCTAGTGTTTTGGCCAGTGGAATTGTTTATCTTGAAGATGGACATTATAACAATTTGACTTGGGATGGAAAAGGAGTCCCTAGTGTCATTGCCAGGAGCAACCTTATCAGGACGAAATGCAACGTTGATGGTTTCTCATTTGGGGTATGGGGCAAGAAACAGCTCGAGTATAAGAATGCTGGGACGCTGGTGGATGGACCGGTTAATTTAGCTGATCACTCAAGTATATGGCCATATATGATAATAAAACGATGTCAAGGGAAAATGTTTGCAGAGTTAAGAGACAGACTATCATGGGAAGATGCAACAAATTTGGCCTCTTTCTTAGGGGAGCAGCTGAACCACCTTCATCTCTTGCCATATCCACCTTTGAATATTTCATCTTTCACTGATATTGAACATGAATTAAGCTTTCCTGAGATTAATGGCTGTGATGCTACTGTTAATTATAAATCAAATGCTGCCGCAGAATGGGGAGTCTTCATCAGAACTTTAGCAAGGAAGAGGAAGGATGTTTCAAGCCGTTTGACCAAGTGGGGACATCCGATCCCAAGGAATCTGATAGAGAAAATTGATGAATATATCCCACCTGATTTTGCTAAGCTGCTAAATATAACCGAGAATTTCCCAAGCGATGCTTGTAAACCTTGCTCCTGGATACACTCTGACATAATGGACGATAACATTTACATGGAACCATCATTGGTTTGTTCTACCTCAAGTGGGAATACAGAAGATGCTGCTCTGGGGGACAATGGTTGTTTCAGCGGCTATGATGAAGTGAAGTCCTGGTGTCCTAGTTACATCCTTGATTTCAGTGATCTTTCAATAGGTGATCCTCTTTTTGACTTGATACCAATTTATTTAGATGTGTTTAGAGGTGATTCAAATCTCCTTAAGCAATTTTTAGAAAGCTACAAACTTCCTTTTGCAAGTCACATATCAAAGTATGGGTCAACCGAGGGTGGTCAGAAGTTTGCCCGACTTTCATATGTTGCCATGTGCTATTGTATCTTGCATGATGAGAATGTCTTGGGAGCTATTTTTAGCATATGGGAAGAACTGAGATCAGCGAAGTCATGGGAAGAAGTTGAGCTGAGAGTTTGGGGGGAGTTGAACAATTACAACGGCTTTCCTTGA 2928 0.4136 MENSEAAAAQRDRRADALGNLRVLPDETLCAILEYLTPRDAARLACVSSVMYILCNEEPLWISLCLKRASGLLRYQGSWKKTALYNEDLPDKYKECQGRSLYFDGFNSLFLYRRLYRCHATLEAFHADNGSVERIKDISLKDFYDQYDAKKPVMLTGLADTWPARHKWTTDQLLLNYGDVAFKLSQRSSQKISMKLKDYVSYMKVQHDEDPLYIFDEKFGEVAPSLLKDYSVPHLFQEDFFDNLDTDKRPSYRWLIIGPERSGASWHVDPALTSAWNTLLYGRKRWALYPPGKVPLGVTVHVNEEDGDVNVETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLEASIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRAGLLALDEDTYENVIRNMSCNGKNLSYSDLSRKEKRAKTNKDVVDLNHESNLSGASRSYELWKDGFSYDINFLSMFLDRDRDHYSSLWCSSNSIGQRELREWLSKLWIQKPEMRELIWKGACVALNADKWLECLSKICAVHNLSLPTDDERLPVGAGSNPVYIVGNSVVKILVERGLEASLYGLGTELGFYSILHETNSSLKKHIPSVLASGIVYLEDGHYNNLTWDGKGVPSVIARSNLIRTKCNVDGFSFGVWGKKQLEYKNAGTLVDGPVNLADHSSIWPYMIIKRCQGKMFAELRDRLSWEDATNLASFLGEQLNHLHLLPYPPLNISSFTDIEHELSFPEINGCDATVNYKSNAAAEWGVFIRTLARKRKDVSSRLTKWGHPIPRNLIEKIDEYIPPDFAKLLNITENFPSDACKPCSWIHSDIMDDNIYMEPSLVCSTSSGNTEDAALGDNGCFSGYDEVKSWCPSYILDFSDLSIGDPLFDLIPIYLDVFRGDSNLLKQFLESYKLPFASHISKYGSTEGGQKFARLSYVAMCYCILHDENVLGAIFSIWEELRSAKSWEEVELRVWGELNNYNGFP* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1280 975 Gene3D Cupin 115 369 - -
Dod09g1280 975 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Dod09g1280 975 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 7 908 - -
Dod09g1280 975 ProSiteProfiles JmjC domain profile. 221 384 IPR003347 -
Dod09g1280 975 SUPERFAMILY Clavaminate synthase-like 129 376 - -
Dod09g1280 975 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 7 908 - -
Dod09g1280 975 SMART fbox_2 24 64 IPR001810 GO:0005515
Dod09g1280 975 Pfam Cupin-like domain 149 371 IPR041667 -
Dod09g1280 975 Gene3D - 9 95 - -
Dod09g1280 975 SUPERFAMILY F-box domain 12 81 IPR036047 GO:0005515
Dod09g1280 975 Pfam F-box-like 23 67 IPR001810 GO:0005515
Dod09g1280 975 SMART cupin_9 212 379 IPR003347 -
Dod09g1280 975 SUPERFAMILY Protein kinase-like (PK-like) 673 910 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1280 Dod-Chr9 33912305 33921515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1280 9 971 Glycosyltransferase AT1G78280 61.168 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod09g1280 Cupin_8 2.8e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1280 - - gmx:100792541 1681.77