Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1279 ATGGCGGCCGCACCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCGGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTTTCCGCCGCCGCCGACAACGAGGAGCTGACGGTGGAGGAGAGGAACCTCCTCTCCGTGGCGTACAAGAACGTGATCGGCGCTAGGCGCGCGTCGTGGCGCATCATCTCTTCGATTGAGCAGAAGGAGGAGAGCCGTGGGAACGAGGACCACGTTTCGGTGATCCGCGACTACCGATCCAAGATCGAGTCGGAGCTGTCCAACATCTGCGACGGGATCCTGAAGCTCCTCGACTCACGCCTCATCCCGTCGGCCTCCTCCGGCGACTCCAAGGTCTTCTACCTGAAGATGAAGGGAGACTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGCAAGGAGGCCGCTGAGAGCACCCTCGCCGCCTACAAATCTGCTCAGGACATTGCTAATAATGAGTTGCCTCCAACTCACCCAATTAGGCTGGGTCTTGCTCTGAACTTCTCTGTCTTCTACTATGAAATCCTTAACTCTCCTGACCGTGCTTGCAACCTTGCAAAACAGGCTTTTGACGAAGCCATTGCTGAATTGGATACGCTCGGAGAGGAGTCTTACAAGGACAGCACTTTGATCATGCAACTTCTCCGTGATAACCTCACCCTGTGGACCTCTGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCTAAACAGGATGATCAGCAGTAA 783 0.5607 MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANNELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDDQQ* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1279 260 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Dod09g1279 260 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Dod09g1279 260 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Dod09g1279 260 SMART 1433_4 8 251 IPR023410 -
Dod09g1279 260 Pfam 14-3-3 protein 14 238 IPR023410 -
Dod09g1279 260 Coils Coil 14 41 - -
Dod09g1279 260 Gene3D - 2 251 IPR036815 -
Dod09g1279 260 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Dod09g1279 260 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Dod09g1279 260 PIRSF 14-3-3 2 250 IPR000308 -
Dod09g1279 260 PANTHER 14-3-3-LIKE PROTEIN 16R-RELATED 5 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1279 Dod-Chr9 33907305 33909629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1279 6 260 14-3-3 family AT1G78300 90.625 1.83e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1279 K06630 - gmx:100529128 501.901