Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1260 ATGGCACTAGAGGCTGTGGTTTTCCCACAAGATCCATTCACTTATGGTTGCAAGGATTACTTGTACTCCTTTGTCGGAGGTGGCAGTGCTGCGAGTTCTGGTGGCGCGTGGAGCAGCCACCACCACGACTGTGGTAGCTTCCAAGCAGCAGAGGAAGAGAAAGTGCTCCTCGGAATCATCAACAACAACATAGAACAGAGTCTCCATGCAACTACTTGGGCCTCTTCTAATTCCACATCGGTGTTGCAAAACGTCAAGGAACAATGGGATTCCCACACTTCCTCCCCTGAGGAAACCTGCACCGTTGATCAGTCTCTCACGGCGACTTTCCCTCCTCTCACTGCGTCTTCATCCGTGGAGGGTACGACGGTGGCTACCACGGGCCGCCGCAAACGACGACGCACCAAGAGCGCCAAGAACAAGGAGGAGATCGAGAACCAAAGGATGACCCACATTGCGGTGGAGCGCAATCGCCGAAAACAGATGAACGAGTACCTTGCCGTTCTCCGATCCTTGATGCCTTCCTCATATGTTCAAAGGGGCGACCAGGCGTCTATTATTGGGGGCGCCATTAACTTTGTGAAGGAGCTAGAGCAGCTTTTGCAGTCGATGGAGGGGCAAAAGAAACCACAGGAGAATGGTGGTGATGGTGGCTTAAATGGGTCACCCTTTGCGGAGTTCTTTACGTTTCCTCAGTTCACGACGCGTGCTAACTCAGGTCAACCCGGGCATCACGTCGACGATGGCACAGAACATTCAGGAGCAGAAACAGTGGCCGGTGGCGGACATTGA 792 0.5341 MALEAVVFPQDPFTYGCKDYLYSFVGGGSAASSGGAWSSHHHDCGSFQAAEEEKVLLGIINNNIEQSLHATTWASSNSTSVLQNVKEQWDSHTSSPEETCTVDQSLTATFPPLTASSSVEGTTVATTGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKPQENGGDGGLNGSPFAEFFTFPQFTTRANSGQPGHHVDDGTEHSGAETVAGGGH* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1260 263 MobiDBLite consensus disorder prediction 205 263 - -
Dod09g1260 263 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 241 - -
Dod09g1260 263 Gene3D - 129 213 IPR036638 GO:0046983
Dod09g1260 263 PANTHER MAX DIMERIZATION, MAD 1 241 - -
Dod09g1260 263 Pfam Helix-loop-helix DNA-binding domain 147 198 IPR011598 GO:0046983
Dod09g1260 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 197 IPR011598 GO:0046983
Dod09g1260 263 CDD bHLH_AtFAMA_like 149 212 - -
Dod09g1260 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 209 IPR036638 GO:0046983
Dod09g1260 263 SMART finulus 152 203 IPR011598 GO:0046983
Dod09g1260 263 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1260 Dod-Chr9 33732977 33734360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1260 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G22490 45.455 8.78e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod09g1260 HLH 3.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1260 - - gmx:100805420 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1228 08 16661158 16664489 Dod09g1260 09 33732977 33734360 PCT