Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1248 ATGAGGAAGAAGAGAAAAGGAAGTGAAGCTGATGCGTCCTCTGATCTGCCAGATATTTTGCCTTCTAGTCATGGCTCTACCTCTACCTCATCGAACTTGAAGTGCCATTACTCGCTTGAAGATTGTTTGAGGTTGAAGAAGAGGTGCAAAGAAGATGCTGACACTGAGCCAGCTGCTTCCTATAAAAGTAGGCTTGCTGGCATTGCTACTGCTCCGCCTTGCGGGACATCATCATTGATCACTCCAGGGAGAGGTCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATTGTGGATGATTATGTTTCTGGTGAAACTATTGGGCAGGGAAAATTTGGATCTGTTTGGTTATGCCGGTCCAGGGCTAACGGAGCTCAATTTGCGTGTAAGACTCTGAAGAAGGGGGAGGAGACAGTTCACCGAGAGGTCGAGATAATGCAGCACTTGTCTGGGCATTCTGGGGTTGTGACATTGCAAGCAGTGTATGAAGAAGCTGAATGCTTCCATCTTGTGATGGAATTGTGCTCTGGAGGGCGACTGATTGATCGAATGGTCAAGGAAGGTCCATATTCAGAACAGCGGGCTGCTAATATAGTCAAGGAAGTCATGTTAGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTTACAGCATCAGGAAAGATAAAGCTTGCAGATTTTGGCCTGGCCATGAGAATTTCTGAAGGTCAAAACTTGACTGGTTTGGCTGGTAGCCCTGCATATGTTGCCCCAGAAGTATTGTTGGGGAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTTCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCTGTTTTTGAGGCTATTAAGAATGTCAAATTAGATTTCCAAACTGGCATGTGGGAATCAGTATCTAAACCTGCACGAGACCTTGTTGGGAGAATGCTGACTAGGGATATTTCAGCTAGGATATCAGCTGATGAAGTACTTACGCATCCATGGATATTGTTCTACACAGAGCGGACATTGGCAATGCTGCCCATCAGGACAAAGTTGAAGCACCAAATAGGCGCCGCATGTGGACAGTATGTTGCTACACCTGAAACTAGGTTAGGAAGAAACAGGCTAGATAATGGCTCCCTTAGTGAGGTTTCATCCTCTGAAAGTTGCAATTCAGATGATGAGGATGGATGTGTGCTGATTGATGCGCTTGCCACAGCAATTTCCCATGTGAGGATATCGGAACCAAAGAGGAGCAGGTTGTGCGGTCCCACAGGTCCAATAGTTCTTCAGCAAGGCTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1407 0.4577 MRKKRKGSEADASSDLPDILPSSHGSTSTSSNLKCHYSLEDCLRLKKRCKEDADTEPAASYKSRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIVDDYVSGETIGQGKFGSVWLCRSRANGAQFACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDRMVKEGPYSEQRAANIVKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKNVKLDFQTGMWESVSKPARDLVGRMLTRDISARISADEVLTHPWILFYTERTLAMLPIRTKLKHQIGAACGQYVATPETRLGRNRLDNGSLSEVSSSESCNSDDEDGCVLIDALATAISHVRISEPKRSRLCGPTGPIVLQQGSSNMKANNLCKAF* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1248 468 CDD STKc_CAMK 108 356 - -
Dod09g1248 468 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 450 - -
Dod09g1248 468 MobiDBLite consensus disorder prediction 1 32 - -
Dod09g1248 468 Gene3D Transferase(Phosphotransferase) domain 1 100 397 - -
Dod09g1248 468 SMART serkin_6 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1248 468 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 26 450 - -
Dod09g1248 468 ProSiteProfiles Protein kinase domain profile. 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1248 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Dod09g1248 468 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Dod09g1248 468 SUPERFAMILY Protein kinase-like (PK-like) 100 373 IPR011009 -
Dod09g1248 468 Pfam Protein kinase domain 109 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1248 Dod-Chr9 33581403 33585204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1248 109 357 EF-hand Containing Proteins AT1G50700 45.174 1.97e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod09g1248 Pkinase 2.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1248 - - gmx:100812729 803.127