Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1241 ATGGAATTTGACGAGCACGAAGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCAGCCTCCACCGCCGGGTTACGACTCGTTCGGGAACTCGGCGGCAAGGTCCAAAACAGGAGCCGCCGCCGCAGGAGCTGATAGCGGCTTGGCCGCCGTGACACCGGGTCGGAAAGGTGGGCCCGCGGGGACCGTGAGGTACAGGGAATGTCAAAAGAACCACGCCGTCAGCATCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTTCTGGCGGCCGGAGAGGAAGGCACGCTTGAGGCCGTGACTTGCGCCGCCTGCAACTGCCACCGGAATTTCCACCGCAAAGAGATCGACGGCGAGGTGAGCTCCTTCCACCAGCCGCAGCCGAGGCTGCAGCCGCAGCCACCACTGCACCACCAGTACCCCCACCAATTCTCCCCTTACTACCACCGCGCGCCACCTCCTCCTTCGGCCGGATACCTCCACCACCATCTGGTGACTCCGCCGGTGTCCCAGCACCGCCCCTTGGCTCTGCCTCCTGCGGCGTCGGGAGGGGGGTTCTATAGAGAGGAGGAAGACATGTCCAACCCGAGCAGCAGCGGCGGTGGAGGCGGTGGAAGCGGAAGCGGAACGAAGAAGAGGTTTAGGACGAAGTTCACGCAGGAGCAGAAGGATAAGATGCTGGCATTTGCGGAGCAGTTAGGGTGGAGAATCCAGAAGCATGATGAAGCTGCCGTGGAGCAATTCTGTGCTGAGACCGGTGTGAAGAGACAAGTCCTCAAGGTTTGGATGCACAATAACAAGCACACTCTTGGTAAGAAACCCTAA 825 0.6158 MEFDEHEDQEEEEMGIPEPQPPPPGYDSFGNSAARSKTGAAAAGADSGLAAVTPGRKGGPAGTVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVTCAACNCHRNFHRKEIDGEVSSFHQPQPRLQPQPPLHHQYPHQFSPYYHRAPPPPSAGYLHHHLVTPPVSQHRPLALPPAASGGGFYREEEDMSNPSSSGGGGGGSGSGTKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDEAAVEQFCAETGVKRQVLKVWMHNNKHTLGKKP* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1241 274 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 65 116 IPR006456 -
Dod09g1241 274 MobiDBLite consensus disorder prediction 123 212 - -
Dod09g1241 274 SUPERFAMILY Homeodomain-like 197 272 IPR009057 -
Dod09g1241 274 MobiDBLite consensus disorder prediction 1 15 - -
Dod09g1241 274 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 211 267 IPR006455 -
Dod09g1241 274 Pfam ZF-HD protein dimerisation region 64 116 IPR006456 -
Dod09g1241 274 Gene3D - 196 271 - -
Dod09g1241 274 MobiDBLite consensus disorder prediction 1 60 - -
Dod09g1241 274 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 59 273 - -
Dod09g1241 274 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 66 115 IPR006456 -
Dod09g1241 274 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 59 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1241 Dod-Chr9 33496890 33498177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1241 7 270 ZF-HD Transcription Factor Family AT4G24660 51.119 2.45e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod09g1241 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1241 - - gmx:100820567 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1220 08 16410526 16411833 Dod09g1241 09 33496890 33498177 PCT