Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1240 ATGGGTTACCTCTCTTGCAATGCCGAGTCCGCTATCGCCACCTGCGACCCCTACTACTGGGATCTCAAGAACAAGAACAAGAACAGAAACACAACGAGGACAAGAGCACGCTCTAAGAAGCTCCCTCAAATCCGGGATTTCAACTACGCCGACCTCGTCGCCGCCACCAACGCCTTCTCCGCTGACAGCTTCCTGGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCACCCTCGACGGCGGCAAGCTCATCGCCGCCGTCAAGAAAACTAAGCCAACCAAGCCCACCGCCGCCGCAACAAGCTCCCGCCACCACACCACCTGCACCGGCTGCGGCAACTGCACAAGCCCGGCGGAGAACGAGATCGAGATCCTCTCACGAGTCGCTAGCCCCCGCAGCCTCGTGAACCTCATCGGATTCTGCACCGACCCTAACGGCACCAAACTCATCGTCGTCGAGTACATGCCCAACGGCTCCCTCCACGACCTCCTACACTCCCCGGTCCGCCCTCCCGGTTGGACCGCCCGCGTCCGGTTCGCTCTCCAGGTGGCGAAGGCGGTCCACGCGCTTCACTCCGCGAACCCGCCGGTTATCCACAGAGACATCAAATCCTCCAACGTGTTGATCGACGGCGGGTGGAACGCGAGGCTCGGCGACTTCGGGCTCGCACTCAGGGGACACGTGGAGGACGTTCGCGTGAAGTGCACGCCTCCCGCCGGCACGTTAGGATACCTCGACCCTTGCTATCTTGCGCCGGAGGATCTAAGCGCCAAGAGCGACGTTTTCAGCTTCGGGATCTTGCTGCTCGAGATTGTCAGCGGCAGGAACGCCATCGACGTGAACTACAGCCCGCCGTCCGTGGTGGACTGGGCGGTGCCGATGATAAGGAGAGGCGAGTTCGTTGGGATTTGTGACCGGCGGATCGGAGCGCCGTCTGATGCGGCGGCAATTCGGAAGCTGGCGGTGCTGGCTGCGAGGTGCGTGAGGTCGACGGCGGAGAAGCGGCCGTCGATGGCGGAGGCGGTGGAGTGTTTGAAGGCGGTGAGGAAGAGGATCCGCGCGTCGCCGATATGGAGCGGGTTGATGAGGAGGCGCGTGGAGAGTGAGAAGCCGTTGGCGAGGTGGGAACGGGATTCGTGTGATTACTACGATCACAGGAGTGAGGAGGAAGTTGTGAGGGTGGTGAGGAACAGGATCAGCAACAGGAAGGTATCCAGTGTGACGGGTGTAGAGTATGAGAGTGGACCTTGTTCGAAGCATGTGGTGGCGAGGTCAAAGTCCATCGGTGCTATGAGTGGAACAATTAAAATGAATTCGGATTGGGGTTGGCGCCCGAACCAAGTGGGGCCTGGGTTGAGGAGAAGGAAGGCGAAGGTTGGTGGAGGGATGAGCCTGAACAAGTCTAGGTCTATGGGGGTTTTACAAGGTCCTCGTCTCTTACATTATGGCAGTGCCAGTGAGAATAATAACAATGACAACGGCCCGATTCATTCGTCACTAGAGATGGCAATGTCCAAGTGGCTCATTAATGATAAGTTGGAAAAGAAATTGCTTGAGAAACCGTTAGTTAATTCGATTGGGAATCTGAGAAGCTGA 1596 0.584 MGYLSCNAESAIATCDPYYWDLKNKNKNRNTTRTRARSKKLPQIRDFNYADLVAATNAFSADSFLGKGSHGSVYKATLDGGKLIAAVKKTKPTKPTAAATSSRHHTTCTGCGNCTSPAENEIEILSRVASPRSLVNLIGFCTDPNGTKLIVVEYMPNGSLHDLLHSPVRPPGWTARVRFALQVAKAVHALHSANPPVIHRDIKSSNVLIDGGWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIVSGRNAIDVNYSPPSVVDWAVPMIRRGEFVGICDRRIGAPSDAAAIRKLAVLAARCVRSTAEKRPSMAEAVECLKAVRKRIRASPIWSGLMRRRVESEKPLARWERDSCDYYDHRSEEEVVRVVRNRISNRKVSSVTGVEYESGPCSKHVVARSKSIGAMSGTIKMNSDWGWRPNQVGPGLRRRKAKVGGGMSLNKSRSMGVLQGPRLLHYGSASENNNNDNGPIHSSLEMAMSKWLINDKLEKKLLEKPLVNSIGNLRS* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1240 531 Gene3D Phosphorylase Kinase; domain 1 29 154 - -
Dod09g1240 531 Gene3D Transferase(Phosphotransferase) domain 1 155 357 - -
Dod09g1240 531 Pfam Protein tyrosine and serine/threonine kinase 63 345 IPR001245 GO:0004672|GO:0006468
Dod09g1240 531 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524
Dod09g1240 531 SMART serkin_6 59 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1240 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Dod09g1240 531 PANTHER - 1 512 - -
Dod09g1240 531 SUPERFAMILY Protein kinase-like (PK-like) 37 345 IPR011009 -
Dod09g1240 531 PANTHER OS01G0750732 PROTEIN 1 512 - -
Dod09g1240 531 ProSiteProfiles Protein kinase domain profile. 59 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1240 Dod-Chr9 33477887 33480095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1240 45 356 Receptor kinase-like Gene Family AT3G59420 38.801 2.18e-62 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod09g1240 PK_Tyr_Ser-Thr 3.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1240 - - ahf:112706221 609.372