Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1235 ATGGCACCCAGTTTTGATTGTGTTTCAAGCCTTCTCTGTGCAGAGGAAACCAGCTTTTTTGATGATAACAATTACGGGGGCACCGTGGATGTGTTTGAGGATTCGTGGCGTCCTTGGCGCCACCAAGGCCACAACTTTGGTGGCCCAGATTATGACGGGTTGCCACTTCAGAGTGATGAGTGTTTGGCTTTGATGTTGGAAAAGGAGTGTGAGCACTTGCCTGGTGTTGATTACTTGAACAGGCTACAAAGTGGGGATTTGGACTTTGTGGCAAGAAATGAGGCCATTGATTGGATTCAAAAGGTCCGTGCTCATTTTGGTTTTGGACCTCTTTGTGCATATCTATCCATAAATTACTTGGACCGGTTCCTTTCTTCATATGAATTGCCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCATGCTTATCTCTTGCTGCCAAAATGGAGGAGACTGATGTTCCTTTGTTCCTTGATTTGCAGGTTGGTGAATCGAAGTTTGTATTTGAAGCTAAGACCATTCAGAGAATGGAGCTTCTAGTACTAAGCACATTGAGATGGAGAATGCTAGCAATTACTCCTTTCTCCTTCATTGATTATTTCCTTTGCAAGATCAATGATGATCAGAGTTCATTAAGATCTTCAATTATGCGATCTATCCAACTTATATCGAGCACCATAAGAGGGATTGACTTCTTGGAATTCAAACCATCAGAGTTTGCGGCAGCAGTGGCCATTTATGTTGTTGGGGAAACCCAAACAGTTGACACTGGCAAAGCTATTTCTGCTCTGATTCAACACGTAGAAAAGGAGAGAGTCTTTAAGTGCCTCGAAATGATCAAGGGGGTGTCACCGAATAGTGTCCATGCCAAGGATTCAAGTGATTCTGTCCCTTGTGTGCCCCCAAGCCCAATAGGGGTGTTGGATGCTTCGTGCTTAAGCTACAAAAGTGATGAAATAAATGTTGGTTCATACGAAAACTCTTCACATAATAGCCCTGATCCTAAGAGGAGGAAGTTAAACAAAACCTGTGGATCAGAACTATTGTAG 1056 0.4337 MAPSFDCVSSLLCAEETSFFDDNNYGGTVDVFEDSWRPWRHQGHNFGGPDYDGLPLQSDECLALMLEKECEHLPGVDYLNRLQSGDLDFVARNEAIDWIQKVRAHFGFGPLCAYLSINYLDRFLSSYELPKGRAWTMQLLAVACLSLAAKMEETDVPLFLDLQVGESKFVFEAKTIQRMELLVLSTLRWRMLAITPFSFIDYFLCKINDDQSSLRSSIMRSIQLISSTIRGIDFLEFKPSEFAAAVAIYVVGETQTVDTGKAISALIQHVEKERVFKCLEMIKGVSPNSVHAKDSSDSVPCVPPSPIGVLDASCLSYKSDEINVGSYENSSHNSPDPKRRKLNKTCGSELL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1235 351 SUPERFAMILY Cyclin-like 55 191 IPR036915 -
Dod09g1235 351 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Dod09g1235 351 CDD CYCLIN 92 184 IPR013763 -
Dod09g1235 351 Pfam Cyclin, N-terminal domain 62 191 IPR006671 -
Dod09g1235 351 PANTHER CYCLINS 1 344 IPR039361 -
Dod09g1235 351 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 344 - -
Dod09g1235 351 Gene3D - 75 192 - -
Dod09g1235 351 MobiDBLite consensus disorder prediction 333 351 - -
Dod09g1235 351 MobiDBLite consensus disorder prediction 326 351 - -
Dod09g1235 351 Pfam Cyclin, C-terminal domain 194 289 IPR004367 -
Dod09g1235 351 SMART cyclin_7 97 185 IPR013763 -
Dod09g1235 351 Gene3D - 64 282 - -
Dod09g1235 351 SMART Cyclin_C_2 194 306 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1235 Dod-Chr9 33418254 33421171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1235 45 326 Core Cell Cycle Gene Families AT2G22490 51.515 9.75e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1235 K18810 - gmx:547739 498.049