Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1226 ATGAAAGGAGAGTATGTGGAACAACACCACCACCCAAAGAGTGAAACACCACCCAACATGTTCTCAAAGCTTCAACAACAACAACAACAGCAGCACCATCCATTCCTTCACCACCCGTTTCAACTCTCACGGGATCAATGCCAACAAGTCCCACCGGAGGACGACAACCGGAGCAGCGGCGCCGCCGTCGCACCCAACACGGCCCAGAAGCCCAACTCCTCGGGCTGCGACGGGGCCACAATAGAGGTCGTTAGGCGGCCCAGGGGCCGGCCTCCCGGATCCAAAAACAAGCCCAAGCCGCCAGTAATCATAACGCGCGAGCCCGAGCCCGCTATGAGCCCATACATTCTAGAAGTCTCGGGAGGAAACGACGTCGTTGAGACCCTCGCGAGGTTCAGTCGCCGCAAGAACACGGGCCTCTGTGTCCTCACGGGTTCAGGAACCGTCGCTAACGTCACGCTTCGACAACCCTCCGCAACTCCCGGGGCGACTGTTACTTTTCACGGCCGCTTCGAGATCCTTTCCGTCTCCGCCACCTTCCTACCGCAACCGTCGCCGCCCATCCCCAGCGGATTCGCCATCTCGCTCGCCGGGCCGCAGGGGCAGATCGTTGGAGGCCACGTCGTTGGCGGGTTGATGGCCGCCGGAACGGTTTTCGTGATCGCTGCTTCGTTTAACAATCCTTCGTACCACAGGCTGCCGCCGGAGGAGGAAGAGGCTAGGAACTCGGTCTCCGGTGGGGATGGGCATTCGCCGCCGGAAACCGGCGGCGGCGTGGACAGCGGGCACGGGCAAGCGGAGTCGTGTGGGATGTCGATGTACAGCGTTCACTTGCCGTCTGATGTGATTTGGGCTCCAACGGCAAGGCAGCCGCCGCCACCACCTTACTGA 891 0.6128 MKGEYVEQHHHPKSETPPNMFSKLQQQQQQQHHPFLHHPFQLSRDQCQQVPPEDDNRSSGAAVAPNTAQKPNSSGCDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYILEVSGGNDVVETLARFSRRKNTGLCVLTGSGTVANVTLRQPSATPGATVTFHGRFEILSVSATFLPQPSPPIPSGFAISLAGPQGQIVGGHVVGGLMAAGTVFVIAASFNNPSYHRLPPEEEEARNSVSGGDGHSPPETGGGVDSGHGQAESCGMSMYSVHLPSDVIWAPTARQPPPPPY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1226 296 Gene3D - 113 245 - -
Dod09g1226 296 MobiDBLite consensus disorder prediction 230 270 - -
Dod09g1226 296 MobiDBLite consensus disorder prediction 18 76 - -
Dod09g1226 296 CDD DUF296 114 225 IPR005175 -
Dod09g1226 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 227 IPR005175 -
Dod09g1226 296 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Dod09g1226 296 MobiDBLite consensus disorder prediction 1 106 - -
Dod09g1226 296 MobiDBLite consensus disorder prediction 1 16 - -
Dod09g1226 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 4 295 - -
Dod09g1226 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 295 IPR014476 GO:0003680
Dod09g1226 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1226 Dod-Chr9 33286138 33287546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1226 77 293 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 66.667 3.25e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1226 - - gmx:100788098 403.675