Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1225 ATGCTTCCTTTTACGAGACTCTACGGGTTGGGAAGTAGCACAGGGCATCTTCAGCCCACTGAATCCGACAGTGGGAGATCAAAGGTGGGGATGAGGAAATCGAAACCAACGGCATCAGCATACAAGAATCACAGGGAAGCTGAGAGAAGACGCCGCCACCGAATCAACGCCCACCTCGCCACCCTTCGCTCTCTCCTCCCCAACACCAAGTCAGATAAGGCATCGTTGCTCGGGGAGATAGTAAAACGCGTGAAAGAGCTGAGCAAACGGGCCGATGACGTGGCGCGTCTCCACGACGAAACCGGTTCGGTTCGGTATTTCGGGAACGAACCGGGCGAGTTGGACGAGGCAACGGTGAGCCATTGCGACAGGGAAAAGGAACCGATGCTAATGAAGTGTACGGTGTGTTGCGACGACCGGCCTGGGTTGAACCGGGACAAAGAGCAGGCAATCCATTCGGTTCGGGCGCAGATGGTGACGGTTGGTGGCCAGACCAAGATTGTTGTGGTGATGCAGTGGCCTGTTGGTGATGATGGTGCAAGAAAGGAGGAGGAGATTGGTGCACTGGAGCGGGCTTTGAAGGCCGTGGTTGAGAATCGGGCTGTGGTGGGCTCTCAAATGGACCCCAATAGTTTTGGGCCGTAA 645 0.5581 MLPFTRLYGLGSSTGHLQPTESDSGRSKVGMRKSKPTASAYKNHREAERRRRHRINAHLATLRSLLPNTKSDKASLLGEIVKRVKELSKRADDVARLHDETGSVRYFGNEPGELDEATVSHCDREKEPMLMKCTVCCDDRPGLNRDKEQAIHSVRAQMVTVGGQTKIVVVMQWPVGDDGARKEEEIGALERALKAVVENRAVVGSQMDPNSFGP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1225 214 MobiDBLite consensus disorder prediction 11 50 - -
Dod09g1225 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 87 IPR011598 GO:0046983
Dod09g1225 214 PANTHER TRANSCRIPTION FACTOR BHLH30 32 205 IPR045847 GO:0003700|GO:0006355
Dod09g1225 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 99 IPR036638 GO:0046983
Dod09g1225 214 PANTHER OS09G0463900 PROTEIN 32 205 - -
Dod09g1225 214 MobiDBLite consensus disorder prediction 11 25 - -
Dod09g1225 214 Gene3D - 35 98 IPR036638 GO:0046983
Dod09g1225 214 SMART finulus 45 93 IPR011598 GO:0046983
Dod09g1225 214 Pfam Helix-loop-helix DNA-binding domain 43 87 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1225 Dod-Chr9 33271687 33272483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1225 39 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.805 2.92e-22 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod09g1225 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1225 - - ccaj:109815026 196.438