Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1220 ATGCAGAACTCGAACAAAGAGGAAGCGGAGCGGTTGATAGGGATCGCGGAGAAGTTGCTTCAAGGCAACGACCTGAACGGAGCAAAGGACTTCGCCATCCTCGCCCAAGAAACCGAGCCCCTTCTAGAATCTTCCGACCAGATCCTGGCCATCGCCGACGTCATCCTCGCGGCCTCCGACAACACCAACACCAACAACAACAACAACAACCAACAACCCCCATGGTACGCTATTCTCCAAGTGAACATCGATCGCGATTCCCAAGATCTCCACGTCATCAGGACCCAATACCGAAGGCTCGCCCTCCTCCTCCACCCCGACAAGAACCCTTTCCCCAACGCCCACCACGCCTTCACCCTCGTCTCCGAAGCTTGGGCCGTATTATCCGACCCGGCCCGAAAGCAAGCCTACGACAGCACCCTATGGGCCACACGAACGGCTTCCGGTCCGGCCCAGCAGGAGAAGCTGCCGGTTCGGAGGGGGAGCGAGCCGGCACGGGTCTCGGTGAACTTCTGGACGGCGTGCCCCTACTGCTACACGATGTACGAGTACCCTAGGGTTTACGAGGGTTGCTGCTTGAGGTGCCAGAACCAGAATTGCGAGAGGTCGTTTCACGGCGTTTCGGTTACTAAGATGCCGCAGCTGGTGCCTGGTCAGGACGCTTATTATTGCTCCTGGGGGTTCTTTCCGATGGGTTTCGTGTTCGAGAGTCGGAGAAAGGTGGCGTGGGCGCCGCCGCCGGCAGTGGAGGTTTCCGATTGGGTGCCGTCGCAGATGCCACAGCCGGTGGCGTTTGCTGAGGCGGTGGGCGTTTCCAATGGGGCTGCTCCGCGGAAGCGAGGGAGGCGTCAGAGAGTGGTTTGA 864 0.5972 MQNSNKEEAERLIGIAEKLLQGNDLNGAKDFAILAQETEPLLESSDQILAIADVILAASDNTNTNNNNNNQQPPWYAILQVNIDRDSQDLHVIRTQYRRLALLLHPDKNPFPNAHHAFTLVSEAWAVLSDPARKQAYDSTLWATRTASGPAQQEKLPVRRGSEPARVSVNFWTACPYCYTMYEYPRVYEGCCLRCQNQNCERSFHGVSVTKMPQLVPGQDAYYCSWGFFPMGFVFESRRKVAWAPPPAVEVSDWVPSQMPQPVAFAEAVGVSNGAAPRKRGRRQRVV* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1220 287 ProSitePatterns Nt-dnaJ domain signature. 118 137 IPR018253 -
Dod09g1220 287 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 261 - -
Dod09g1220 287 Pfam DnaJ domain 75 138 IPR001623 -
Dod09g1220 287 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 261 - -
Dod09g1220 287 ProSiteProfiles dnaJ domain profile. 74 141 IPR001623 -
Dod09g1220 287 SUPERFAMILY Chaperone J-domain 72 142 IPR036869 -
Dod09g1220 287 CDD DnaJ 75 130 IPR001623 -
Dod09g1220 287 PRINTS DnaJ domain signature 113 133 IPR001623 -
Dod09g1220 287 PRINTS DnaJ domain signature 97 112 IPR001623 -
Dod09g1220 287 Gene3D DnaJ domain 57 159 IPR036869 -
Dod09g1220 287 SMART dnaj_3 73 133 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1220 Dod-Chr9 33189918 33191887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1220 3 282 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.307 2.56e-84 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1220 - - ahf:112706243 365.925