Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1219 ATGATGCTTAGGCAGGATTCTTCAACCCTATTTCTTTCCAGAATACATGCCCCATGTCGGCCTTTACCTTCTAGATGTAATGTTTTCTTGTGCCGGTCTTCCATGATACCAGCTGGAGGGAGTGAGACCCCACTCATGAAATTGGCTACTATTTCTTTTTCAAGGTCATATGAAACTACATCAGGAAGAACCATTGCACTTCAGTTGATCCCTGCCCTTGGTATCATTGGCTTTGCTGTCTGTGGTCTCGAGCCCCTCCTGCGCCTGAGCAGGATTCTATTTCTGCAAAGGACTGATAAAAGTTGGAAGAAAAGTAGTTCATGTCATGTTATGACATCATATCTTCAGCCCTTGCTGATGTGGACGGGGGTAATGCTCATGTGCAGGGATTTAGATCAACTAGTCTTATCATCAACGACCAGTCAGGCTGTGAAGCAACGACTGCTGAGTTTTGTGAGATCTTTGTCGACAGTCCTTACATTTGCTTATTGTTTTTCAAGCTTAATTCAAGAAGCACAAAGATTTTTTCTGGAGATGAGCGACTCCAGTGATGAAAGAAATATGAGCATTGATTTTACTGGTAAAGCTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCCACGCAGAAGTGGTTGACTGCTGGTGGCTTGGGCACAGTCTTGCTTTCTCTTGCAGGTCGTGAGATATTCATAAACTTCCTTTCAAGTGTAATGATTCACGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAGATTAAAGGAGATGAGGTTTCTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTGAGAGGTGCTGATTGTGAAGCAGTTCATATTCCTAACCATAAATTGAGCGTAAATGTTGTGAGAAACCTTAGTAAGAAATCTCATTGGCGCATCAAGAGTTACCTTGCTATTAGTCACTTGGATGTTAACAAGATCAATAGTATTCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACAGAAGGGTTTTTCTGGAGTATATAAATCCAGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTCAAAACTTCACATTCTGAAGAGTATCTCCGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAGTTATCAGTCATCATCGAGCTCGGCTAGCAACACCCATCCGCACAATTCAGAAGATGTACAATGATACTGATTTGGAAACTGATCCATTTGATGACACCATTTTCGCCCGTTCTGGAGCAAAGGCCAACCACCCATTCCCACTGACAGAATCACCTAATAACTTCAAGCCTTCAATTCATTCAACCATCACGAATGAGGAGAAAGTTCCCGAGTTTGATGAGACCTTAAGATCTGACTTCAAAGTAGAATCCGACGATTTGGCAGGGCCATCGACCCCCACATCCAGTGTAAACTCCAAGGAGAAATTGAAGTCAAGTTCTGAAGCCAAAAGCCAGAATATGGTTTCTGATAATTCAGTCCAGAAGACCTCCAAATCCAAATCCCTCCAGCTGAAAGAGCGAGCAGGGATTGCAGGAAAGGGGACATCACCCGAACTTTTGTTAACTTACAATAAGTCTGACAGATCTATTACTTCTTCACCATCAAAGAAAGGTGAAGACAAAGAGAAACCTATCCCTTCCTTGAAAGACAATATTGTTCTTGATGCTGCCCTACTCGGCTCAAAACGAACTCTTGCAATTGATGATGAAGTGAGTCCATCAGTCCCTGCAGAATCCCAAGAATTTGCTGTCCAACAGAATGGGCGTGAACCTTCGGTTAGCAAGGATAATAGGGATGGTAAGAAGAGTAGATGA 1884 0.4236 MMLRQDSSTLFLSRIHAPCRPLPSRCNVFLCRSSMIPAGGSETPLMKLATISFSRSYETTSGRTIALQLIPALGIIGFAVCGLEPLLRLSRILFLQRTDKSWKKSSSCHVMTSYLQPLLMWTGVMLMCRDLDQLVLSSTTSQAVKQRLLSFVRSLSTVLTFAYCFSSLIQEAQRFFLEMSDSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLLSLAGREIFINFLSSVMIHATRPFVVNERIQTKIKGDEVSGKVEHVGWWSPTIVRGADCEAVHIPNHKLSVNVVRNLSKKSHWRIKSYLAISHLDVNKINSILADMRKVLAKNPQVEQKKLHRRVFLEYINPENQALMILISCFVKTSHSEEYLRVKEAILLDLLRVISHHRARLATPIRTIQKMYNDTDLETDPFDDTIFARSGAKANHPFPLTESPNNFKPSIHSTITNEEKVPEFDETLRSDFKVESDDLAGPSTPTSSVNSKEKLKSSSEAKSQNMVSDNSVQKTSKSKSLQLKERAGIAGKGTSPELLLTYNKSDRSITSSPSKKGEDKEKPIPSLKDNIVLDAALLGSKRTLAIDDEVSPSVPAESQEFAVQQNGREPSVSKDNRDGKKSR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1219 627 MobiDBLite consensus disorder prediction 484 522 - -
Dod09g1219 627 MobiDBLite consensus disorder prediction 443 461 - -
Dod09g1219 627 Gene3D - 153 252 - -
Dod09g1219 627 MobiDBLite consensus disorder prediction 555 571 - -
Dod09g1219 627 Pfam Mechanosensitive ion channel 195 402 IPR006685 GO:0016020|GO:0055085
Dod09g1219 627 Gene3D - 253 306 IPR023408 -
Dod09g1219 627 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 3 589 - -
Dod09g1219 627 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 3 589 IPR045042 -
Dod09g1219 627 SUPERFAMILY Sm-like ribonucleoproteins 238 308 IPR010920 -
Dod09g1219 627 MobiDBLite consensus disorder prediction 594 627 - -
Dod09g1219 627 MobiDBLite consensus disorder prediction 439 466 - -
Dod09g1219 627 MobiDBLite consensus disorder prediction 478 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1219 Dod-Chr9 33182415 33188268 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1219 4 593 Mechanosensitive Ion Channel Family AT1G58200 52.412 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1219 K22047 - gmx:100797302 821.231