Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1216 ATGGTCTACCCAGGTTCAATGCAATTGCCTTGTGACGTCAGGCTTCCCCGCAATAAGGGATTCTGTAGTTTTCATAACAATCCAATGGTTGTTGGGCGATTACATTTGGTTACCATAAATCTTTCACCACGTAGTTTGAGGCAGGATTATTCGGCACTCCATCTTCTCAGCAGAGTACATGCTCCTATAAGGCGTTTGCCTTCCAGATATAAAGGTTTTGTATGTCGTTCTGCCCTAATACCAGGTGGAGCGAGTGGGACTCCACTCATGAAATCTGCTACTATTTTTTTTACAAGGTCACATGATGCTTTACGGGGAAGCCCAGTTTTGCTTCGATTGATCCCAGCACTTGGTATCATTGCCTTTGCTGTTTGTGGTCTCGAGCCACTCCTACGTCTCAGCAGAGTTCTATTTCTTCAAAGGACTGACAGTAGTTGGAAGAAAAGTAGTTCCAGATATATTATGACATCTTACTTTCAGCCTTTGCTATTGTGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGGCCAGCCAGGCTGTGAAGCAAAGGCTGCTGAATTTTGTGAGATCTTTGTCGACTGTGATTTCGTTTGCTTACTGTTTATCAAGCTTCATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCAGTGATACAAGAAATGTGGGCCTTGATTTCGCTGGGAAAGCTGTATATACTGCTGTATGGGTTGCTGCAGTGTCATTGTTCATGGAGTTACTAGGTTTCTCCACACAGAGGTGGTTAACTGCTGGTGGTTTGGGAACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTTACGAACTTCCTTTCAAGTATAATGATCCATGCAACTCGGCCATTTATTCTGAATGAGTGGATCCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACTGTTGTGAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTAAATGTTGTGAGAAACCTGACTCAGAAATCTCATTGGCGCATCAAAAGTTACATTGCTGTCAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGGAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGCAAAAATTGCACAGAAGGGTTTTTCTAGAGAATGTCAATCAAGAAAACCAGGCTCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTCTGTGTTAAGGTATAA 1299 0.4172 MVYPGSMQLPCDVRLPRNKGFCSFHNNPMVVGRLHLVTINLSPRSLRQDYSALHLLSRVHAPIRRLPSRYKGFVCRSALIPGGASGTPLMKSATIFFTRSHDALRGSPVLLRLIPALGIIAFAVCGLEPLLRLSRVLFLQRTDSSWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSEASQAVKQRLLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSSDTRNVGLDFAGKAVYTAVWVAAVSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTVVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAVSHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNQENQALMILISCFVKTSHFEEYLCVKV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1216 432 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 431 IPR045042 -
Dod09g1216 432 Pfam Mechanosensitive ion channel 239 428 IPR006685 GO:0016020|GO:0055085
Dod09g1216 432 Gene3D - 192 296 - -
Dod09g1216 432 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Dod09g1216 432 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 431 - -
Dod09g1216 432 Gene3D - 298 353 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1216 Dod-Chr9 33167544 33171552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1216 24 431 Mechanosensitive Ion Channel Family AT1G58200 69.438 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1216 K22047 - gmx:100796022 752.666