Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1210 ATGCCGGAAAAGAAGCCCAAGAAGGTGTCCTTCACGGAACAAGACGCTGCTACACTCACACAAAGGTATGATGCAACAACGGTTCTGACGTTACTTCAGGAAGTGGCACAGCATGCTGATGCGAAGATTGATTGGAATGAATTAGTGAAGAAAACTTCAACTGGGATTTCTAATGCCAGGGAATATCAGATGCTCTGGCGCCACCTGGCGTACCGTGACTCCCTTGTTGATAATCTGGAAGACAGTGCTGAACCTCTGGATGATGATAGTGACCTAGAATGTGAGCTTGAAGCATTAACCCCTGTAGGTGTTGAATCTGTAGCAGAGGCTGCAGCATGTGTGAAGGTAATGATTGCTTCTCGCTCGTTGAGTGAATCAGCCCCTAGTAGCTCAACAATTGAGGCTCCACTGACTGTAAATGTTCCAGTTTGCCATTCATTAAGAACTCCTAATGAAAGTTCACGGTCCTCTGGTTTGTTGCAAGGGACAAACATTATTTTTCCAGTTTCTGTTCAGAGACAAACACTCCCAACTGTATCATCAACAGATGGTATGGAAACCAAGGGATCAGGTGGTGGCAACATGGCTTCCAAAAGAAAAAGAACAGCATGGTCAGAGGAAGAGGACAAACAGCTACGAGCTGCTGTTCAAAGATGGGGTGAAGGGTATTGGGCTACCATGGTGAAAGAAGACAACTTTCCTATTAAGAGAAGTCCAACTCAGTTGGCTCAGAGGTGGAGTGTTTTACGAAAGAAAGATGGCAGTACCAATTTAGGAACCAACTTGACCAGCACATCTTATACCACTGCTGAACAGCTGGCAACTCGTCACTCATTATCTTTAGCCCTTGATGACATGCCATTCAAAAAGTTAGCTGCTTCTGGAACGAACAATCAGGGTAGGACATCCTTGAATATACCAAGTAAAAGCCAAGTGCAGCGAATTACAAGTGAGGCTGTGACTGTTCCCCCTAATTCTATACCACCTCAACATCCTTCTCAACAGCCTTTATGTAGTGTTTCCTCTGCAAAATCTAGATTAGTACCTGAAAAACCAGGGTCAACAGGTAATTCAACACCAAATCCTGATGTAAAAGCCATTGCACTTTCTGCTGGTGCCCGAATAATTTCCCCATCAAGTACTGCATCACAATTAAAGGTTGCGCAAGTAAGAAATGTTGTGCCTTCAACAAATAGTTCATTGGCAAAGTCATCCACTCTTGCTGGTTTGCCTTCTGAATCAAAGGTACAATCGAGCACTAGTTCAAGTGTTGCTCGTGTTCCCTCCCAAGCAGCTGTTGCAATCGCATCACCTGCATCAAGCACTAGTGGGGGTAAAGCTTCTACAACTTTGTCTATATTGCCTAAACAAGACAAGCATGTTACCTCTATGGTTAATGAAGCTCCAGTAAAGCAAGAAGTTAATACTTGCCCTGCACCAAAAGAGAGGGTCCAGAATAATGAGAAGCTAGAGCAAGATAGAAGCAGGAATATACCTGTTGAAGAAGCTACGACTCTTGCAATCGAAAGTATAAGAAGTGAGGAAGTAGTGAAGACTACTGAGAATCAACAAGTAGTTGCAGGTAGCAATGTGGCCAAAGGGAGCCATGATTTTGATCAAGAGAGGAGTAAAATTACAATTAATGGAAGTTCTGAGATCAAACCATGA 1668 0.4359 MPEKKPKKVSFTEQDAATLTQRYDATTVLTLLQEVAQHADAKIDWNELVKKTSTGISNAREYQMLWRHLAYRDSLVDNLEDSAEPLDDDSDLECELEALTPVGVESVAEAAACVKVMIASRSLSESAPSSSTIEAPLTVNVPVCHSLRTPNESSRSSGLLQGTNIIFPVSVQRQTLPTVSSTDGMETKGSGGGNMASKRKRTAWSEEEDKQLRAAVQRWGEGYWATMVKEDNFPIKRSPTQLAQRWSVLRKKDGSTNLGTNLTSTSYTTAEQLATRHSLSLALDDMPFKKLAASGTNNQGRTSLNIPSKSQVQRITSEAVTVPPNSIPPQHPSQQPLCSVSSAKSRLVPEKPGSTGNSTPNPDVKAIALSAGARIISPSSTASQLKVAQVRNVVPSTNSSLAKSSTLAGLPSESKVQSSTSSSVARVPSQAAVAIASPASSTSGGKASTTLSILPKQDKHVTSMVNEAPVKQEVNTCPAPKERVQNNEKLEQDRSRNIPVEEATTLAIESIRSEEVVKTTENQQVVAGSNVAKGSHDFDQERSKITINGSSEIKP* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1210 555 ProSiteProfiles Myb-like domain profile. 196 250 IPR001005 -
Dod09g1210 555 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 530 - -
Dod09g1210 555 MobiDBLite consensus disorder prediction 321 363 - -
Dod09g1210 555 MobiDBLite consensus disorder prediction 527 555 - -
Dod09g1210 555 Gene3D - 194 255 - -
Dod09g1210 555 SUPERFAMILY Homeodomain-like 199 252 IPR009057 -
Dod09g1210 555 Pfam Myb-like DNA-binding domain 201 248 IPR001005 -
Dod09g1210 555 SMART sant 200 252 IPR001005 -
Dod09g1210 555 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 530 - -
Dod09g1210 555 MobiDBLite consensus disorder prediction 177 208 - -
Dod09g1210 555 CDD SANT_TRF 204 251 - -
Dod09g1210 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 196 254 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1210 Dod-Chr9 33114965 33120608 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod09g1210 Myb_DNA-binding 6.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1210 - - adu:107460964 569.311