Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1174 ATGCACGTTGATCCCTCACTAAAATCAAACATTCAACTCTCCAACGACCACCGTGGGGAGCCCATCTCCTCCCTCACCCCGTTGACCTCACTGGATTCAGCCTCAGAGGCATGTTCTCCGCCGATGACGTTCCCACCTCCCCCTCTCTCTGCGTTTGTTCTGCAGTCACGCACAAAATGCCGTTTTTCCAATAGTAATGTCGTTATCATTGGTGTCGTTGATGAGTTGTACCAGCAGCAGCCTCTTGTGGTTGACACCGTGCCGGTTCTGTCGCTGAACTCCCTGCCATTGGGGTTCCGTTTCCGTCCAACAAACAAGGAGCTGATTGATTTCTACTTGCGACAAAAGATCAATGGGAATGGCGGTGACGTTTGGGTCTTTCACGAAATTGATGTCTGCGAATGGGAGACTTGGGATTTGCCTTGTATTTTTTTTTCCCTCCTGCTTCTCTTTTGTAATTTCACTCTGATTTCAAATCTCTTGTTTCAGCAAGTGAGAAGGTATGGACTTGGTTTGACTTCACTGGTAAGTGTTGGTTCTTGA 543 0.4788 MHVDPSLKSNIQLSNDHRGEPISSLTPLTSLDSASEACSPPMTFPPPPLSAFVLQSRTKCRFSNSNVVIIGVVDELYQQQPLVVDTVPVLSLNSLPLGFRFRPTNKELIDFYLRQKINGNGGDVWVFHEIDVCEWETWDLPCIFFSLLLLFCNFTLISNLLFQQVRRYGLGLTSLVSVGS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1174 180 SUPERFAMILY NAC domain 89 143 IPR036093 GO:0003677|GO:0006355
Dod09g1174 180 MobiDBLite consensus disorder prediction 7 26 - -
Dod09g1174 180 MobiDBLite consensus disorder prediction 1 26 - -
Dod09g1174 180 Gene3D NAC domain 104 151 IPR036093 GO:0003677|GO:0006355
Dod09g1174 180 ProSiteProfiles NAC domain profile. 95 180 IPR003441 GO:0003677|GO:0006355
Dod09g1174 180 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 90 142 - -
Dod09g1174 180 Pfam No apical meristem (NAM) protein 96 141 IPR003441 GO:0003677|GO:0006355
Dod09g1174 180 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 90 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1174 Dod-Chr9 32587424 32588901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1174 89 141 NAC Transcription Factor Family AT3G49530 64.151 1.56e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g1174 NAM 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1174 - - aip:107609038 123.635