Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1127 ATGCCTGATCAGCGTGACCGACTACGACGCAAGAATAGTAACCGCCCTTTGGACACAGCCGACACGAACCCGGTTGCACGACCCGACCCGAAGAATATCGGACCGCAACTGAAAAGGATAACAGCAGCCGCCGCGATTGCGAGGAATCGGAGGCAGGAGGAGGCGATCGCCCCCATGGATGAGTACGATAGCGGTGGCCGGAGCGCCGATAAGGCTCCCGGAGCTGAAGACGAAGCCACCACAGCTCCAATTCCCGAGAAGGTCCAGGTTGGTGGTTCTCCGTTATACAGGATTGAGAAAAAACTTGGGAAGGGAGGATTTGGACAAGTCTATGTTGGTCGGCGTGTTGGAGCTGCTAGTTTCAGTGAAAGAACTGGTGCTGGGGCTGTTGAGGTAGCATTGAAATTTGAGCACAGAAGCAGCAAGGGTTGTAATTATGGACCTCCATATGAGTGGCAGGTGTACAATGCATTAGGTGGTAGTCATGGCGTTCCAAGAGTTCATTACAAAGGGCGGCAAGCTGACTACTATGTTATGGTTATGGATATGCTTGGTCCTAGTCTATGGGATGTTTGGAATAACAACTCGCACACGATGTCTACTGAAATGGTGGCATGCATTGCGATTGAGGCTATCTCCATATTGGAGAAGATGCATTCGAGAGGATATGTTCATGGTGATGTAAAACCTGAGAATTTTTTGCTGGGCCCTCCAGGAACTCCTGATGAGAAGAAGTTGTTCCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCTGGCCTTCACGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGTACAGTTAGATATGCTAGTGCACATGCTCATCTTGGTAGGACGGGTAGCAGGAGGGACGACTTAGAATCTCTTGCTTACACACTTGTCTTCCTTCTTCGTGGTCGGCTGCCTTGGCAAGGATATCAGGGAGAAAATAAGGGATTTCTTGTCTGCAAGAAGAAGATGGCCACTTCTCCTGAGACTTTGTGTTGCTTTTGTCCTCAACCTTTTCGGCAGTTTGTTGAATATGTGGTTAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCCCTGTTCGATGGAATTGTAGGTCCAAATCCAGACATCAGGCCAATAAACACTGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGACATAAGAGAGGGCGATTGACCATGGAAGAGGATGATGATGAGCAACCAAAGAAGAGGGTCAGAATGGGAATGCCTGCAACACAGTGGATTAGTGTTTACAATGCTCGCCGACCGATGAAGCAAAGGTATCATTACAACGTTGCTGATGGGCGGCTCTCCCAACACATTGAGAAAGGAAATGAGGATGGATTATATATCAGCAGCGTGGCTTCTTGTTCTAATTTGTGGGCACTCATTATGGATGCTGGCACGGGTTTCACTGCACAAGTTTATGAACTCTCTTCCCACTTTCTTCACAAGGAATGGATTATGGAACAGTGGGAGAAGAACTATTACATTAGTGCTATCGCTGGAGCCAATAATGGGGGTTCGTTGGTTGTAATGTCTAAAGGGACCCAGTTCTTGCAACAATCCTATAAAGTCAGCGATTCATTTCCATTTAAGTGGATCAACAAAAAGTGGAGAGAAGGATTTTATGTCACTGCTATGGCCACTGCTGGTAGCAAATGGGCAATTGTAATGTCCCGTGGTGCTGGATTCACAGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGAATTCACCGGAGGTGGGATGGTGGTTACAGAATAACCTCAACTGCTGCAACATGGGACCAAGCTGCTTTTGTCCTTAGTGTGCCAAGAAGAAAACCGGCCGATGAAACTCAAGAGACACTCCGTACATCTGCATTTCCCAGTACTCATGTCAAGGAAAAATGGGGAAAGAATCTCTATATTGCTTCTATTTGTTACGGGAGAACAGTTTCATGA 1989 0.4661 MPDQRDRLRRKNSNRPLDTADTNPVARPDPKNIGPQLKRITAAAAIARNRRQEEAIAPMDEYDSGGRSADKAPGAEDEATTAPIPEKVQVGGSPLYRIEKKLGKGGFGQVYVGRRVGAASFSERTGAGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQADYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSGLHVEYDQRPDVFRGTVRYASAHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLICQVGHKRGRLTMEEDDDEQPKKRVRMGMPATQWISVYNARRPMKQRYHYNVADGRLSQHIEKGNEDGLYISSVASCSNLWALIMDAGTGFTAQVYELSSHFLHKEWIMEQWEKNYYISAIAGANNGGSLVVMSKGTQFLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSKWAIVMSRGAGFTDQVVELDFLYPSEGIHRRWDGGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWGKNLYIASICYGRTVS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1127 662 Gene3D Transferase(Phosphotransferase) domain 1 64 416 - -
Dod09g1127 662 MobiDBLite consensus disorder prediction 1 84 - -
Dod09g1127 662 MobiDBLite consensus disorder prediction 1 16 - -
Dod09g1127 662 ProSiteProfiles Protein kinase domain profile. 96 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1127 662 CDD STKc_CK1 96 371 - -
Dod09g1127 662 ProSitePatterns Protein kinases ATP-binding region signature. 102 135 IPR017441 GO:0005524
Dod09g1127 662 PANTHER - 59 636 - -
Dod09g1127 662 Pfam Protein kinase domain 96 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1127 662 MobiDBLite consensus disorder prediction 53 74 - -
Dod09g1127 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Dod09g1127 662 PANTHER CASEIN KINASE-RELATED 59 636 - -
Dod09g1127 662 SMART serkin_6 96 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1127 662 SUPERFAMILY Protein kinase-like (PK-like) 96 375 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1127 Dod-Chr9 31989996 31996495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1127 101 371 MAP Kinase Kinase Kinase AT5G50180 24.138 1.73e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dod09g1127 Pkinase 3.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1127 - - gmx:100778855 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1127 09 31989996 31996495 Dod08g1517 08 32607947 32616161 PCT