Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1121 ATGATGGCGGTGAGTTCAGCGTGTAAGGAAGGGATGAGCAAGGTGGTAATGGATAACGGCAAGTATGTGAGGTACACGCCGGAGCAGGTGGAAGCACTGGAGAGGCTTTACCATGAATGCCCCAAACCCAGTTCCCTCCGCCGCCAGCAGCTCATCAGAGAGTGCCCCATTCTCTCCCACATCGAGCCCAAACAGATCAAGGTTTGGTTCCAAAACCGAAGATGCCGAGAGAAGCAACGGAAAGAGTCTTCACGGCTGCAAGCTGTAAACAGGAAGCTGACAGCAATGAATAAACTACTGATGGAGGAAAACGACAGATTGCAGAAGCAGGTGTCACAGCTCGTGTATGAGAACAGCTTTTTTCGCCAGCAGACACAAAATCAGGCGACCCTTGCCACGACGGACACGAGTTGTGAGTCGGTGGTAACAAGCGGTCAGCGAAACTTGACACCTCAGCATCCGCCAAGGGATGCCAGCCCTGCTGGACTTTTGTCCATTGCGGAGGAGACTTTAGCAGAGTTTCTATCAAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCACGTGCATGCGGCCTTGTGGGTCTAGAACCTGCCAGGGTTGCTGAAATCCTCAAAGATCGGCTCACATGGTTTCGTGATTGCCGAACTGTGGATGTTCTAAATGTGATGTCCACTGGAAATGGGGGAACCATCGAACTTCTTTACATGCAGCTTTATGCGCCAACAACTTTGGCACCTGGGCGTGACTTCTGGTTGCTGCGCTACACATCTCTTTTGGAGGATGGTAGTCTTGTGGTTTGTGAAAGATCACTTAACAACACTCAGAATGGTCCTGCTATGCCTCCAGTGCAGCATTTTGTTAGAGCAGATATGCTGCCGAGCGGGTATCTCATTAGACCTTGCGAAGGAGGGGGATCCATTATTCATATTGTTGATCATATGGTTTTAGAGCCTTGGAGTGTACCTGAAGTTTTGAGACCACTTTATGAGTCATCAATGCTGCTTGCTCAAAGGACAACGATGGCGGCTTTACGTCATTTAAGGCAGATTTCTCAAGAAGTTTCTCAACCAAGTGTCACAGGATGGGGAAGAAGGCCTGCAGCTTTACGTGCCCTTAGTCAGCGATTGAGCAAGGGCTTTAACGAAGCTGTTAATGGGTTTGCTGATGATGGCTGGTCCTTGTTAGAGAGTGATGGCATTGATGATGTCACCCTTCTCGTGAACTCATCACCTAGCAAGATGATGGGAGCAAATATTGGCTACAACAATGGATTCCCACCAGTGAGCAGTTCTGTGCTATGTGCCAAAGCATCCATGCTGTTACAGAATGTCCCTCCAGCAATTCTTCTTAGATTCCTTCGGGAGCACCGATCTGAGTGGGCTGATAGCAGCATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTACCTTGCCTGGGGTCCGAGCAGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTAGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGCTACTATAGGGATGACATGACTATACCCGGTGATATTTTCCTCTTGCAGCTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACTGGTGCAGAACTTATATTTGCTCCGATTGATGCATCTTTCTCTGATGATGCTCCCATTTTGCCTTCCGGTTTTCGCATCATACCACTTGATTCTAGCTCGGATCCTGCTAGTCCAAACCGTACACTTGATCTTGCTTCTGCTCTTGAAGTTGGAACCACAGGGAACAAAGCATCCGGTGAAAATTCAGGTCATTCTGGGTGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAATCCACCTTCAAGACAACATTGCAAGTATGGCCAGGCAATATGTCCGCAGTATCATTGCATCTGTTCAGAGGGTTTCATTAGCACTCTCTCCTTCCCGTTTTGGTTCTCCCAATGCTTTTCATTTACCACCTGGCACTCCTGAGGCACAAACACTTGCTCGGTGGATCTGTAACAGCTATAGGTTCTATCTGGGGGTAGAACTACTCAAGTGTGAGGGCAGTGAACCCATTCTCAAATCCCTTTGGCATCACACAGATGCAGTTTTGTGCTGCTCTTTGAAGGCATTACCTGTTTTTACGTTTGCAAATCAAGCTGGACTTGACATGCTAGAAACAACCCTGGTTGCTCTTCAAGACATCACTCTGGAGAAAATCTTTGATGACAATGGAAAGAAAACACTGTGCTCTGAGTTTCCCCAGATAATGCAGCAGGGTTTTATGTGTATTCAAGGTGGCATCTGTTTATCCAGCATGGGGAGGCCAGTGTCTTACGAGAGAGCAGTGGCATGGAAAGTATTAAACGAAGAAGAAACCGCTCATTGCATCTGTTTCATGTTCATCAATTGGTCTTTCGTTTGA 2526 0.4786 MMAVSSACKEGMSKVVMDNGKYVRYTPEQVEALERLYHECPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNQATLATTDTSCESVVTSGQRNLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLTWFRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSLLESDGIDDVTLLVNSSPSKMMGANIGYNNGFPPVSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTIPGDIFLLQLCSGVDEHAVGTGAELIFAPIDASFSDDAPILPSGFRIIPLDSSSDPASPNRTLDLASALEVGTTGNKASGENSGHSGCTKSVMTIAFQFAFEIHLQDNIASMARQYVRSIIASVQRVSLALSPSRFGSPNAFHLPPGTPEAQTLARWICNSYRFYLGVELLKCEGSEPILKSLWHHTDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPQIMQQGFMCIQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1121 841 CDD START_ArGLABRA2_like 160 375 - -
Dod09g1121 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 841 IPR044830 GO:0003700
Dod09g1121 841 SMART HOX_1 18 84 IPR001356 GO:0003677
Dod09g1121 841 Gene3D - 200 381 IPR023393 -
Dod09g1121 841 SUPERFAMILY Bet v1-like 165 376 - -
Dod09g1121 841 Coils Coil 86 117 - -
Dod09g1121 841 ProSiteProfiles 'Homeobox' domain profile. 16 80 IPR001356 GO:0003677
Dod09g1121 841 Pfam START domain 166 374 IPR002913 GO:0008289
Dod09g1121 841 Pfam MEKHLA domain 700 840 IPR013978 -
Dod09g1121 841 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Dod09g1121 841 CDD bZIP 73 112 - -
Dod09g1121 841 Pfam Homeodomain 21 79 IPR001356 GO:0003677
Dod09g1121 841 CDD homeodomain 21 81 IPR001356 GO:0003677
Dod09g1121 841 SMART START_1 165 375 IPR002913 GO:0008289
Dod09g1121 841 SUPERFAMILY Homeodomain-like 20 82 IPR009057 -
Dod09g1121 841 Gene3D - 14 87 - -
Dod09g1121 841 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1121 Dod-Chr9 31905008 31913173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1121 17 841 Homeobox Transcription Factor Family AT4G32880 80.556 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod09g1121 START 6.6e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1121 K09338 - gmx:100815727 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1121 09 31905008 31913173 Dod09g1121 09 31905008 31913173 ECH