Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1111 ATGAGCATTGAACTGCCCCAAAACTCCTCATCGTCATCATCAGAGGCCGAAAGCAGCACCTCAAACTCAAACCCAAACTCTTCTCCACCAACATCACCATCCTCTTCTTCCTTTGACTCCAAGAAGAAGAAGAACACCACCACCCCCGCCACCACCACAAAGCGCATTAGAGACTCTAGCAATAAGCACCCGGTGTACCGGGGAGTGCGGATGCGGAACTGGGGAAAATGGGTGTCTGAAATCCGGGAGCCAAGGAAGAAGTCCCGCATATGGCTGGGGACATTCGCCACGCCGGAAATGGCAGCCAGGGCACACGACGTCGCCGCCCTCAGCATTAAGGGCTCCTCCGCCATCCTCAACTTCCCCCACCTCGCCTCCTCCCTCCCCCGCCCCGCCTCCCTCTCCCCCCGTGACGTCCAAGCCGCCGCCGCTAAAGCCGCCCGAATGGTCCACTTCGACCACCTCATTACCCCATCACCATCGTCCTCGTCATCATCATCATCATTGGCTTCTGCAATGGAGTTAACGTCTACTACTACAGGCTCCGATGATGATGAGGATGATGATGAGGAGTTGAGCGAGATCATCGAGCTCCCAAAATTGGAAAGCGGTGGTGGTGAGTTGGAGAAGGAGTTCGTGTTCGTGGACTCCGTGGAATATGGGTGGATGTATCAGCCACCATGGTTGGAGACAGCGGAAGAATTAGACTATGATGATGGGGTTGTAAGTGCTTTTCAGAGCTTGCTCTGGAATTAA 756 0.5476 MSIELPQNSSSSSSEAESSTSNSNPNSSPPTSPSSSSFDSKKKKNTTTPATTTKRIRDSSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGSSAILNFPHLASSLPRPASLSPRDVQAAAAKAARMVHFDHLITPSPSSSSSSSSLASAMELTSTTTGSDDDEDDDEELSEIIELPKLESGGGELEKEFVFVDSVEYGWMYQPPWLETAEELDYDDGVVSAFQSLLWN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1111 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 234 - -
Dod09g1111 251 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 CDD AP2 66 124 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 MobiDBLite consensus disorder prediction 157 191 - -
Dod09g1111 251 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 MobiDBLite consensus disorder prediction 157 179 - -
Dod09g1111 251 MobiDBLite consensus disorder prediction 1 55 - -
Dod09g1111 251 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Dod09g1111 251 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Dod09g1111 251 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 10 234 - -
Dod09g1111 251 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Dod09g1111 251 MobiDBLite consensus disorder prediction 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1111 Dod-Chr9 31756610 31758307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1111 30 251 AP2-EREBP Transcription Factor Family AT5G11590 54.741 4.24e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod09g1111 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1111 K09286 - cit:102608812 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1111 09 31756610 31758307 Dod09g1111 09 31756610 31758307 ECH