Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1100 ATGGCCAAAATCGCTCTCGGAACCACCCGAGAGGCCACCCAGCCAGACTGCATTCAGGCCCTCGTCGTTGAGTTCATATCCACTTTCCTCTTTGTCTTTGCTGGCGTTGGTTCTGCCATGGCCGCTGACAAGCTAGGTGGAGATGCACTAGTCGGCTTGTTTGCCGTGGCCGTGGCCCATGCGCTTGTGGTGGCCGTAATGATATCCGCCGCCCACATTTCCGGTGGCCACCTCAACCCCGCCGTCACCCTTGGCCTCCTCGCCGGTGGCCACATCACCGTCTTCCGCTCCGCCCTTTATTGGATCGATCAATTACTAGCATCTGCAGCAGCTTCTTACCTCCTTTACTACCTCTCCGGAGGACAGGCAACTCCAGTTCATACACTGGCAAGTGGAGTGGGGTACGCACAAGGAGTAATTTGGGAGATAGTGTTGACCTTCTCTTTGTTGTTCGCGGTGTATGGTACCATGGTGGACCCAAAGAAAGGAGCACTTGCTGGAATTGGGCCCACACTTGTTGGGTTCGTAGTGGGGGCTAACATCCTAGCTGGTGGGGCATTCTCCGCGGCTTCAATGAACCCAGCAAGATCTTTTGGGCCTGCCTTGGTTTCTGGCAACTGGACCGATCACTGGGTCTACTGGGTTGGGCCTCTCATTGGCGGTGGCCTTGCAGGTTTCATCTACGAGCATTTCTTCATTGACCGTTCCCATGTTCCACTCCCTCGAGACGAGGAAAACTAA 741 0.5533 MAKIALGTTREATQPDCIQALVVEFISTFLFVFAGVGSAMAADKLGGDALVGLFAVAVAHALVVAVMISAAHISGGHLNPAVTLGLLAGGHITVFRSALYWIDQLLASAAASYLLYYLSGGQATPVHTLASGVGYAQGVIWEIVLTFSLLFAVYGTMVDPKKGALAGIGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYEHFFIDRSHVPLPRDEEN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1100 246 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 Pfam Major intrinsic protein 13 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PANTHER AQUAPORIN-8 2 245 IPR034294 -
Dod09g1100 246 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Dod09g1100 246 SUPERFAMILY Aquaporin-like 11 242 IPR023271 -
Dod09g1100 246 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod09g1100 246 PANTHER AQUAPORIN TIP4-1 2 245 - -
Dod09g1100 246 ProSitePatterns MIP family signature. 77 85 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1100 Dod-Chr9 31681127 31682832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1100 1 245 Major Intrinsic Protein MIP AT2G25810 80.000 5.72e-132 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1100 K09873 - gmx:100811447 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1100 09 31681127 31682832 Dod09g1100 09 31681127 31682832 ECH