Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1097 ATGGAGAGGGTTGTCGGGGGAAAGTATAAGCTCGGTAGGAAAATCGGGAGCGGCTCCTTCGGTGAAATTTATGTTGCAACAAGTATTGAAACATCTGAGATTGTTGCCGTTAAGATGGAGAACAAGAAGGCTAAACATCCGCAACTACTGTACGAGGCCAAGTTGTACAATCTTCTTCAAGGAGAAAGTGGTGTTCCAAGTATGAAATGGTGTGGCATTGATGGAGACAATAATGTTCTGGTTATTGATCTTCTGGGACCAAGTCTCGAGGACCTTTTTGTCTACTGCGGGAGGAAATTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTTACGAGAATAGAGTACATGCATTCCAAGGGATTTCTGCACAGAGACATCAAACCAGATAATTTCCTTATGGGTCTTGGGAGGAGATCAAGCCAGGTTTATATTATTGATTTTGGACTCGCAAAGAGATTTAGGGACCCTCACACAAACAAGCATATCCCTTACAGAGAAAACAAGAACTTAACTGGGACTGCTCGTTATGCAAGTTGCAATACTCACATAGGAATTGAGCAAAGTCGTCGGGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAAAGGAAAAATACGACAAGATTTGTGAGAAGAAGCTATCAACTCCCATTGAGGTGCTTTGCAAGTCATATCCCGTGGAGTTCGCTTCTTACTTTCATTATTGCCACTCTTTGACGTTTGATCAACAACCAGATTATGGATTCTTGAAGCGACTGTTTCACGATTTGTTCACACGTGAAGGATATGATTCTGACCATTTGTTTGACTGGACCATCCTGAAGTATCAGCAGGCGCAACAGACAAAGAGACAAAATCAACAATTATCATCTCCTTCAGCTGCTGTGCCTAGCAGTCTAGCTGCCGCGCCTAGCAATCTAGAATCAGTGGCTGTCGATAAGCATAAAGGAGTCAATGATTCAGCTCATAATCATATTACTGTAACAAAACTGTTAGCCAATCTTGATCGTCCAAGTGTGCCTGTGCAGTCTAAACTATCCAATGTTCAGAGTCAGCATGCCAAGAATCAGGCCGAGAAACATAATGTGAACAATGGTCCATCAACTTCATCTGCCATGGCCAGATCCTCTAAAGAAAATGTCTCAAAACCAGAAAGGTCCATAGGAACCTCAAACCTTGGTCGTGTATTTGGGAGCAATTCCCGTACTTCAAGCGGTTGGATTCCTTCACTTCGCCGAATTTCTTCAGCCAAATAG 1314 0.4262 MERVVGGKYKLGRKIGSGSFGEIYVATSIETSEIVAVKMENKKAKHPQLLYEAKLYNLLQGESGVPSMKWCGIDGDNNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLTRIEYMHSKGFLHRDIKPDNFLMGLGRRSSQVYIIDFGLAKRFRDPHTNKHIPYRENKNLTGTARYASCNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAVTKKEKYDKICEKKLSTPIEVLCKSYPVEFASYFHYCHSLTFDQQPDYGFLKRLFHDLFTREGYDSDHLFDWTILKYQQAQQTKRQNQQLSSPSAAVPSSLAAAPSNLESVAVDKHKGVNDSAHNHITVTKLLANLDRPSVPVQSKLSNVQSQHAKNQAEKHNVNNGPSTSSAMARSSKENVSKPERSIGTSNLGRVFGSNSRTSSGWIPSLRRISSAK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1097 437 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 422 - -
Dod09g1097 437 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod09g1097 437 PANTHER CASEIN KINASE-RELATED 1 422 - -
Dod09g1097 437 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1097 437 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1097 437 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Dod09g1097 437 MobiDBLite consensus disorder prediction 363 437 - -
Dod09g1097 437 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Dod09g1097 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod09g1097 437 Pfam Protein kinase domain 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1097 437 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1097 Dod-Chr9 31661193 31667878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1097 9 215 EF-hand Containing Proteins AT4G23650 29.167 7.31e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod09g1097 Pkinase 3.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1097 K08960 K08959 gmx:100810377 711.064