Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1087 ATGGAGCAGAGCGAAACGGCCTTGGATTTAGCTCCGAGGAAATCGGCGAGGCAGTTGGATTTCACGGCGCCGAACCTGAAACATCCGCCGCCACCGACGCCGCCGCAGCAGTCGCCGTCGCAATTGCAATTGACTCTGCATCCGCCAGGGCAGCAGCAGCAGCAACAACCGCAGCCGTGGTTGTACTCCCAGCAGCAGCAGAGAGCAACGCGGTCTCCGGCGACGCCGCAAACGAAAGCGGCGCGGCCGCAGCTGGTTTCGCCGATTCCGAGAATTCCGCATCCTGTGCAGAAGCTTCCGGTGAAGGCGTTGCAAGTGTCGAAGCAGGAGTCTCCTATACCACGACCTCAGTATAATGTGGAATTAAAAGACAGCACTCCAAAGAAACCAAAACAATGTAATTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAATGTTTTGCAGCTGGGATTTACTGTGATGGTTGCAATTGTGCAAATTGTCATAATAATGTGGATAATGAGGCTGCTAGACAGGAGGCTGTTGGAATAACATTAGAACGAAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAAGCAAGAGATTCCAAGGTAGATGTGTCTGAAATTCAAGTAGTTGGAAAGCACAATAAAGGATGTCACTGTAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATCCTCTGCTCTGAAAATTGCAAATGCATGGATTGCAAGAATTTTGAAGGAAGTGATGAAAGAAGAGCAATTTTTCATGAAGAGTATAATCTAGTTCACATCAAACAGGCAACTAGTGCTGCCATCAGTGGAGCAGTTGGATCCTCCACCTCCAGAACCCTCATAACACCCAAGAAGAGGAAAATTCAGGAAATATTATCTGGCAAATCAGCAAAAGATCAAACTGTTAGCCAGACCACTCAGTATAAACAGGAAATCGATCCAATAGTTTCATCACCTACATCTCTGCCAGCTTCGTTTGTTGCCGACACTGCCAACACAAGAATTTCAGGGTCTTCAAGATCTACATACAGGTCACTGTTGATGGATGTCCTCCAGCCACAGAATGTGAAGAGTCTCTGTTCACTTTTTGTTGTTCTCTCAGGAGCACCTGCAGTGAGAAATACAGAAATTAGTGGCAAAGTGGACCAGAAAATAGAAGCTGGGAAATTTGAAGCTTCTATTGCTTCATCAGCTCAATTGCTGCAGGACAGTAGAGATGTCCACAAGCCTGCATGTGATGATTGTAAAGATGGAACAGATAGAGTTGATATTGACAATTACAATAGGCCATTGTCACCAGAAACACTAGCATTGATGTGTGATGAACAAGATGAGGTATTTCTGGGTAATGGTTCTACAAATGAAGGGGCATGCGACAACAATTGTCAAAACACAATTCAAAAGTCATCTACTTCTGACGGATGCCCTGATGTGTATGGAGAGCAGGAAAGGGTTGTCCTGACAAAGTTCTGGGATGTTCTTCGCGAACTCATTACTCTTGGAAGCATAAAAGAAAGCATTGTTGATAGTAACATGGCGTCTAGAAGCAAGCTCGCCAAATTCCAAAGGTCCTTGGCGTTTGATGCTGCTTCAAACATGGCCGGGCAATCTCAGCCCCCCTTCTCGAGAGCCTTTGCCTCCTCCCCCTCCTGTTCCTCCTCTGATGGAGCAAGATGCCCCTACCGAAGGAAATTTGAAGCGACGCCAATTGAGGAAGCAATCGAATGTCGAGTTGACTTCAAGACGGGGAAAAAATCCGGCTTCTGA 1797 0.4608 MEQSETALDLAPRKSARQLDFTAPNLKHPPPPTPPQQSPSQLQLTLHPPGQQQQQQPQPWLYSQQQQRATRSPATPQTKAARPQLVSPIPRIPHPVQKLPVKALQVSKQESPIPRPQYNVELKDSTPKKPKQCNCKNSRCLKLYCECFAAGIYCDGCNCANCHNNVDNEAARQEAVGITLERNPNAFRPKIASSPQEARDSKVDVSEIQVVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSDERRAIFHEEYNLVHIKQATSAAISGAVGSSTSRTLITPKKRKIQEILSGKSAKDQTVSQTTQYKQEIDPIVSSPTSLPASFVADTANTRISGSSRSTYRSLLMDVLQPQNVKSLCSLFVVLSGAPAVRNTEISGKVDQKIEAGKFEASIASSAQLLQDSRDVHKPACDDCKDGTDRVDIDNYNRPLSPETLALMCDEQDEVFLGNGSTNEGACDNNCQNTIQKSSTSDGCPDVYGEQERVVLTKFWDVLRELITLGSIKESIVDSNMASRSKLAKFQRSLAFDAASNMAGQSQPPFSRAFASSPSCSSSDGARCPYRRKFEATPIEEAIECRVDFKTGKKSGF* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1087 598 ProSiteProfiles CRC domain profile. 129 253 IPR005172 -
Dod09g1087 598 SMART CXC_2 213 254 IPR033467 -
Dod09g1087 598 SMART CXC_2 128 168 IPR033467 -
Dod09g1087 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 216 250 IPR005172 -
Dod09g1087 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 131 165 IPR005172 -
Dod09g1087 598 PANTHER TESMIN/TSO1-RELATED 1 526 IPR028307 -
Dod09g1087 598 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 526 - -
Dod09g1087 598 MobiDBLite consensus disorder prediction 39 82 - -
Dod09g1087 598 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1087 Dod-Chr9 31526011 31535480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1087 110 516 CPP Transcription Factor Family AT4G29000 51.537 2.75e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dod09g1087 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1087 - K21776 gmx:100811459 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1087 09 31526011 31535480 Dod09g1087 09 31526011 31535480 ECH