Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1070 ATGTTTGCAATTGCACCTTTCTCGCCGGCGAACCCGCCGGTAATTAGGTCACCGTCGCCGCCGGAGACTAGCGCTACTCCTCCGCCGATTCTGGAGCCCTCAGCGCCACCTCCACTCAAATCCCCGCCGTCCCCGCCTCCTGAATCGTCTCCGGCTCCTTCAGTCACCTTACCGACGCGCTCAGTTCCGCCGCCGGCGTTACCTCCAATGGGACCAAGGCCTTCGAACTCTGCACCTCCAATTAATTCACCGCCGATTCAAGTCCCTCCGGCGTTTACCTCGCCGTCTCCGCCGGACATTCGACTTGTTCCGGCTTCTTCGCCTCCGCATCCGTCAAACGAGAATCCAAATCCGCCACCAGTTCAGTCTCCTCCATCTCCGGCAACTTTGATTCAGCCGGCGGTTCCTTTTCCGTCGCCGGAGACTCCAGCATCTCCGCCGCCACCGTTGTTTTCGCGTCACCGGAAAATTGCTCCGGCCCGACCATCCCCCACCGCCACTTCTCCACCACCTTCACCCTTGGCATTGCCGGAGGCTTGGCCTCCGGCACCGGAAACAACCTCTCCGCCTCCTCCGGTGACCTTTTTTCCGTCCACAGGACCTCCTTTGTCACCTCGGGCAGAACCAGCACCTTCAATCCCCACGGTGCCGGAAATTTCGCCTGAGATGAAGTCGCTGCCGCCGCCACTGGTTCCAGCGACGAGCCCAGCGCCACCGTCAATCTTGCCGGTGGCGGTGGAAGTTGAGAAGCATTCAGAGTTCAACATGTCAACTGGAGTCATCGTTGGGATTGTAATTGTAGGTATCGTTCTTGTTCTTCTTGTTGCTGTTGTATTAGTTCTGTGCAGGAAGAATAGCAACAAAAAGAAGCAGAAGAATTTGTACACACATCAACGTGAAGAACCATCACCTTATGTTGGATCAAAGGGGTCTCATGTTATTAGAGTGCTGTCAAATAATGATCCATCACATCATCTCATGGAGGGTGGTGGAGCATTTGGCTCTGTTAATTATTCCGGGGATGTGACAGCAGTTCCAAACCATGCTGCAAGCATTGCCTTTGGTCCTGTGAATGGCATTTTCACGTATGATGAACTAGTGGTAGCAACTAACGGTTTCTCTGAGGCCAACATTCTTGGGGAAGGTGGTTTTGGGTATGTATACAAAGGAGTTCTCCCGTGTGGAAAGGAGATTGCAGTTAAGCAGTTGAAAACAGGAAGCCAGCAAGGAGAGCGAGAATTTCAAGCTGAGGTTGAGACTATTAGCAGGGTGCATCATAAGCATCTTGTTGAACTGGTTGGTTACTGCATTACCAGGGCAGAAAGATTGCTTGTTTACGAATTTGTTCCAAATAGCACATTGGAATTCCACTTACATGGGGAAAGGAAGCCAGTTGTAGACTGGGAAAAGAGAATTAAGATTGCCTTGGGATCTGCAAAAGGGCTGGCATATCTACATGAAGATTGTAATCCGGCAATCATTCACCGTGATATCAAAGCATCTAACATTCTTCTTGATTTTAATTTTGAAGCAAAGGTTTCGGACTTTGGCCTGGCAAAAATCTTTCCTAGCACTGATGGTTGCATTACTCACCTCACCACACGAGTGGTGGGAACCTTTGGGTATTTGGCCCCAGAATATGCATCAAGTGGTAAATTAACAGATAAATCAGATGTATATTCCTATGGCGTGATGCTTTTAGAACTAATTACTGGACGTCCACCAATCACTGCTGCAGGAACAAGGAATGAGAGCCTGGTTGATTGGGCTAGGCCCTTGCTTGCTCAAGCGCTACAAGATGGTGACTTCAACAATCTTGTTGATCCAAGGTTGCAGAAGAATTATGAAGCTGATAAGATGGCTAGAATGATTACCTGTGCAGCTGCTTGCGTGCGCCATTCAGCCAGACTTCGACCCCGTATGAGCCAAATAGCTGGTGCCTTAGAAGGAATGGTTGCTCTAACCGATCTTCTTGGAGATATCACACCGGGGCATACCACATTATATAGTTGGTCAGATAGTTCAAATTATGACGCCTGCCAATACCAGCAGGACATAAGAAACTTCAATTTGGCATTATCATTTCAGAAGTACAGCACTAGCGGGCATAGTGAAAGCACTAGTGCTTATGGTCTTCACCTATCTGAGTCAAGTAGTGAAGTTCAACAAACAAGTCAAGACATCCTGTAG 2190 0.4936 MFAIAPFSPANPPVIRSPSPPETSATPPPILEPSAPPPLKSPPSPPPESSPAPSVTLPTRSVPPPALPPMGPRPSNSAPPINSPPIQVPPAFTSPSPPDIRLVPASSPPHPSNENPNPPPVQSPPSPATLIQPAVPFPSPETPASPPPPLFSRHRKIAPARPSPTATSPPPSPLALPEAWPPAPETTSPPPPVTFFPSTGPPLSPRAEPAPSIPTVPEISPEMKSLPPPLVPATSPAPPSILPVAVEVEKHSEFNMSTGVIVGIVIVGIVLVLLVAVVLVLCRKNSNKKKQKNLYTHQREEPSPYVGSKGSHVIRVLSNNDPSHHLMEGGGAFGSVNYSGDVTAVPNHAASIAFGPVNGIFTYDELVVATNGFSEANILGEGGFGYVYKGVLPCGKEIAVKQLKTGSQQGEREFQAEVETISRVHHKHLVELVGYCITRAERLLVYEFVPNSTLEFHLHGERKPVVDWEKRIKIALGSAKGLAYLHEDCNPAIIHRDIKASNILLDFNFEAKVSDFGLAKIFPSTDGCITHLTTRVVGTFGYLAPEYASSGKLTDKSDVYSYGVMLLELITGRPPITAAGTRNESLVDWARPLLAQALQDGDFNNLVDPRLQKNYEADKMARMITCAAACVRHSARLRPRMSQIAGALEGMVALTDLLGDITPGHTTLYSWSDSSNYDACQYQQDIRNFNLALSFQKYSTSGHSESTSAYGLHLSESSSEVQQTSQDIL* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1070 729 SUPERFAMILY Protein kinase-like (PK-like) 355 648 IPR011009 -
Dod09g1070 729 ProSiteProfiles Protein kinase domain profile. 373 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1070 729 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 107 699 - -
Dod09g1070 729 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Dod09g1070 729 MobiDBLite consensus disorder prediction 11 153 - -
Dod09g1070 729 Gene3D Phosphorylase Kinase; domain 1 342 448 - -
Dod09g1070 729 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 107 699 - -
Dod09g1070 729 Pfam Protein kinase domain 374 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1070 729 MobiDBLite consensus disorder prediction 1 232 - -
Dod09g1070 729 CDD STKc_IRAK 379 651 - -
Dod09g1070 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Dod09g1070 729 Gene3D Transferase(Phosphotransferase) domain 1 449 656 - -
Dod09g1070 729 MobiDBLite consensus disorder prediction 163 232 - -
Dod09g1070 729 SMART serkin_6 373 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1070 Dod-Chr9 31364100 31368774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1070 191 725 Trihelix Transcription Factor Family AT4G32710 51.111 2.64e-151 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod09g1070 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1070 - - gmx:100810262 722.62