Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1049 ATGGGAGGAGGCAATGGACAGAAGTTCGAAATGGCTTGTGAGAAGAACATGGAGAAACATAAACCTCCAAACGCTAAGGTCCACGAACGCAGCTATAACCCTCACTACTTGGCCATTATCATTCTTTATGTTGGTGGAACATATGACGTAACTGCTGTTCAGCTGTGGCAGGAAGACTGCCAAGAGTGGAGGCCAATGTGCAGAGCCTTTGGAATGGTGTTTGATGCTGAAAACTCGCCAAGGGGTAACATTAGGTTCAGGTTACAATTAAGTGGCAGTGTAGGGTTGTATTGGGTAGAGTCCAAGAATGTTATCCCCAGCGATTGA 327 0.4618 MGGGNGQKFEMACEKNMEKHKPPNAKVHERSYNPHYLAIIILYVGGTYDVTAVQLWQEDCQEWRPMCRAFGMVFDAENSPRGNIRFRLQLSGSVGLYWVESKNVIPSD* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1049 108 PANTHER EXPANSIN-LIKE B1 25 107 - -
Dod09g1049 108 PANTHER EXPANSIN-B3 25 107 - -
Dod09g1049 108 SUPERFAMILY PHL pollen allergen 26 108 IPR036749 -
Dod09g1049 108 Gene3D - 13 108 IPR036749 -
Dod09g1049 108 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 35 108 IPR007117 -
Dod09g1049 108 Pfam Expansin C-terminal domain 26 106 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1049 Dod-Chr9 30964333 30965911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1049 26 108 Expansin Gene Family AT4G17030 57.831 1.47e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1049 - - gmx:100802855 137.887