Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1045 ATGCCACCTTCTATTTATACCCCTCAAGCTCCTTCACTCATTCCCTTTTCCCTCTCTCCACTCTCTCTCTCTCTCTCTAACTTCTCTCTCTCTTACTGTTCAACTTTTCTCGATTCACTTGCCGGCGTTCTGGCTGCGCCTCAGTCCCTACCACCGCCGCCGGCTTTCCCGAACTCCGGCGAGCTCAAACGAATCATGGCCACGACGGGCTTCGATATGGACTATGATTGGTGGATTGCTGCTTTATCGAACGACGACGGCGACGACGGATCGCCCAACCAAAACGACGACGTCAAGACCGCCGGCATCGCTTTCCCCGGCGCCGGCGCTTTCGAGAATCCGGATGCGTTGACCTCAATTTTAACTTGTGGTGGACTAGCAGATACCACCAATACCATTGTCTGTTCCCAAAACGGCACGCCCAAGCATTCCACCGTTTCTGCTACTCTTGATTCCCAGTCATCGATTTGTGGCACTGTTGGCAGCCCAGTCTCTGCTAATAAACCAAACGGCGGAGAGAATCAAGCCAAAGGAGCTACAAGTGGTTCCTCTGAGGCGTCTGATGAGGAAGATGAAGCAGGTCCTTGTGAACAGAGCACAAATCCTATTGAAGTGAAGCGCAATAGAAGGAAAGAGTCTAATCGTGAGTCCGCAAGGAGGTCAAGAAGAAGGAAGCAAGCGCAGTTGGCAGACCTTGAGAAGCAGGTTGAAAAACTGAAACAGGAGAATGCAACCCTATGCAAGCAGTTTACAGATGCTAGTCAACAATTTCGTGAGGCAGAAACTAATCACCGAGTTCTAACATCAGGCGTAGAAGCCTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCACTCGGAGCTCTTTAACCACGTTAAACAGCCAGATTCTTCCGCCTCAGTGCCAATTGAGCACGGTACCACCACAACTCAACACGACTGGCCTGCGCCGCACGGCACATGTCTCTCCAACCGTCACTGTCCATGGAAACGATGCCTCCTCATATGGTGTTGTCCCTGTTGGTGGACACAACCCAGCTCTTGGGCTTGAAAACTTGGATATGACTTACAATGATATCAATAATGGAGTCACAAACAATGCTCTAAGCTCTATGAACATCTGGCAGCATCAGTAA 1137 0.5022 MPPSIYTPQAPSLIPFSLSPLSLSLSNFSLSYCSTFLDSLAGVLAAPQSLPPPPAFPNSGELKRIMATTGFDMDYDWWIAALSNDDGDDGSPNQNDDVKTAGIAFPGAGAFENPDALTSILTCGGLADTTNTIVCSQNGTPKHSTVSATLDSQSSICGTVGSPVSANKPNGGENQAKGATSGSSEASDEEDEAGPCEQSTNPIEVKRNRRKESNRESARRSRRRKQAQLADLEKQVEKLKQENATLCKQFTDASQQFREAETNHRVLTSGVEALRAKVKLAEDMVTRSSLTTLNSQILPPQCQLSTVPPQLNTTGLRRTAHVSPTVTVHGNDASSYGVVPVGGHNPALGLENLDMTYNDINNGVTNNALSSMNIWQHQ* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1045 378 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Dod09g1045 378 Pfam bZIP transcription factor 204 250 IPR004827 GO:0003700|GO:0006355
Dod09g1045 378 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Dod09g1045 378 PANTHER BASIC LEUCINE ZIPPER 63 114 376 - -
Dod09g1045 378 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 267 IPR004827 GO:0003700|GO:0006355
Dod09g1045 378 Coils Coil 215 256 - -
Dod09g1045 378 MobiDBLite consensus disorder prediction 161 183 - -
Dod09g1045 378 Gene3D - 205 262 - -
Dod09g1045 378 SUPERFAMILY Leucine zipper domain 206 256 IPR046347 GO:0003700|GO:0006355
Dod09g1045 378 PANTHER BZIP TRANSCRIPTION FACTOR 114 376 - -
Dod09g1045 378 MobiDBLite consensus disorder prediction 161 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1045 Dod-Chr9 30909349 30913756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1045 151 353 bZIP Transcription Factor Family AT5G24800 52.133 5.74e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod09g1045 bZIP_1 8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1045 K25784 - gmx:780555 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1045 09 30909349 30913756 Dod09g1045 09 30909349 30913756 ECH
Dod09g1045 09 30909349 30913756 Dod08g1556 08 35602826 35608556 PCT