Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1030 ATGCTCTCTATGTTTGCGACGTGTATTTTTCCATCATTGTGTGACAGTGACACAGATGCTCAAGCTCTGGTGAGGTTCAAAAGCTCACTGTCCAATGCTGATAATGCCTTAAAGAACTGGGGGAATGAGTCTATCAGCATTTGCAGCTGGACTGGTTTGTTATGTAAGGATCAGAAACTTCATGGATTGAGATTAGAGAATATGGAACTAAGTGGCAATATTGATGTAGACACCCTTTTGGAATTGCGGAGTTTGAGAACTTTTAGTGTCATTAACAATAACTTTGAGGGTCCAATGCCTCTATTCAAGAAGCTCGTGAGCTTGAGGGGGTTGTTTCTGTCCAATAACAAGTTCTCTGGTGAAATCCCGGATGATGCATTTGAAGGCATGAGAAGACTGCAGAGGGTGTTGTTGGCAGAAAATGGGTTCAGTGGTCATATTCCTACATCCCTTGCTCAATTGCCAAGACTTTTGGATGTGGACTTGCATGGAAATAGCTTTGGAGGCAACATACCAGAGTTTCAACAGAGTGATTTCAGAGTGTTTAATTTGTCCAATAACCAGTTGGAGGGTCCAATACCAAAAGGCTTAAGCAATAGGGATCCAAGCTCATTTGCTGGCAACAAAGCTCTATGTGGAAAACCTCTAAGCCACCATTGCAGCAGTGAATCACACCCCGATCCAAATGAAGGGAAAGAAAACAAGAAGCGTAGCAACCTCATCACTGCAATTGTAGTGCTGGTTGTGGTGCTGGTCGTGGTTGTCTTGGTTACAATACTAGCACTTCTTCTCATCCGCCACCGCAGAAAGCAAAGCGAAAAAAGGCCCTTGTTGGTGGAGAATAATGCACAAGCAGCACAAGTACAATCCCAGAGCAGTACTATTAGTAGTGCAGTAGTTTCAAGTGAGGCCACCAAATCCATTGATGTGGTGGCAAGTGTACCCAAGAAGGGTGAAGATGGAGACTTCAAATTTGTTAAGGAAGACAGGGAGGGCTTTGATTTGCAAGACCTGCTTCGGGCCTCAGCTGAGGTTCTTGGTAGTGGCAGCTTTGGATCAACCTACAAGGCTATGGTCTTGAATGGGCCAGTTGTCGTGGTGAAGAGGTTCAAGCACATGAACAATGTTGGGAAACGAGAGTTTTTTGAGCACATGAGAAGGCTTGGGAGGTTGACACATCCTAATTTACTCCCTCTTGTTGCATTCTACTACGGGAAAGAGGAGAAGCTTTTGGTCTATGACTTTGTTGAGAATGGCAGCTTGGCTAGCCATCTTCATGGTAGACGTGGTTCAGGCTTAGACTGGCCAACTCGATTGAAGATCATAAAAGGTGTAGCCAGGGGCTTAGGCTACCTACACAGAGAATTCCCCGACCAGAAACTCCCACACGGGCACCTCAAATCCTCCAACGTTATCCTCAACCACTCATTCGAGCCACTGCTGACGGAGTACGGTCTGGTCCCGGTTGTGAACAAGAGCCACGGCCAGCAGTTCATGGCGTCATTCAAGTCCCCAGAGGTGATGGTGAGCCACCACGACCACGACACCCCCACCGACAAGGCCGACGTGTGGTGCTTGGGGATCCTCATCCTTGAGCTGCTGACAGGGAAGTTCCCCGCGAGCTACCTTAGGCATGGGAAGGGTGCGAGCGGCGATGAGGAGCTGGCAATGTGGGTGAAGTCCATTGCTGGGGAGGATGAAGAAGCTGGGTGGAGTGGTGAGGTGCTTGATAGGGAGATCGTGGGTGGTGGTGGTGAGGGTGAGATGCTGAAGCTGTTGAGGATTGGTGTTGGTTGCTGTGAGTGGGATTTGGAGAGTAGGTGGGATTGGAGGGAGGCTGTTGCTAGGATTGAGGACTTGAAGGAGAGGGATGTTGCTGAGGATGCTGAGAATTCTGGTGTTAGTGATTCGGACTTGTATTCTCTTTGA 1929 0.4811 MLSMFATCIFPSLCDSDTDAQALVRFKSSLSNADNALKNWGNESISICSWTGLLCKDQKLHGLRLENMELSGNIDVDTLLELRSLRTFSVINNNFEGPMPLFKKLVSLRGLFLSNNKFSGEIPDDAFEGMRRLQRVLLAENGFSGHIPTSLAQLPRLLDVDLHGNSFGGNIPEFQQSDFRVFNLSNNQLEGPIPKGLSNRDPSSFAGNKALCGKPLSHHCSSESHPDPNEGKENKKRSNLITAIVVLVVVLVVVVLVTILALLLIRHRRKQSEKRPLLVENNAQAAQVQSQSSTISSAVVSSEATKSIDVVASVPKKGEDGDFKFVKEDREGFDLQDLLRASAEVLGSGSFGSTYKAMVLNGPVVVVKRFKHMNNVGKREFFEHMRRLGRLTHPNLLPLVAFYYGKEEKLLVYDFVENGSLASHLHGRRGSGLDWPTRLKIIKGVARGLGYLHREFPDQKLPHGHLKSSNVILNHSFEPLLTEYGLVPVVNKSHGQQFMASFKSPEVMVSHHDHDTPTDKADVWCLGILILELLTGKFPASYLRHGKGASGDEELAMWVKSIAGEDEEAGWSGEVLDREIVGGGGEGEMLKLLRIGVGCCEWDLESRWDWREAVARIEDLKERDVAEDAENSGVSDSDLYSL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1030 642 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Dod09g1030 642 ProSiteProfiles Protein kinase domain profile. 340 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1030 642 Gene3D Ribonuclease Inhibitor 178 220 IPR032675 -
Dod09g1030 642 Gene3D Ribonuclease Inhibitor 16 177 IPR032675 -
Dod09g1030 642 MobiDBLite consensus disorder prediction 220 235 - -
Dod09g1030 642 SUPERFAMILY Protein kinase-like (PK-like) 344 618 IPR011009 -
Dod09g1030 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 628 - -
Dod09g1030 642 MobiDBLite consensus disorder prediction 216 235 - -
Dod09g1030 642 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Dod09g1030 642 Pfam Protein kinase domain 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1030 642 PANTHER LRR RECEPTOR-LIKE KINASE 12 628 - -
Dod09g1030 642 SUPERFAMILY L domain-like 18 200 - -
Dod09g1030 642 Gene3D Transferase(Phosphotransferase) domain 1 416 638 - -
Dod09g1030 642 Pfam Leucine rich repeat N-terminal domain 17 55 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1030 Dod-Chr9 30739732 30743082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1030 18 638 Receptor kinase-like Gene Family AT5G35390 47.812 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod09g1030 Pkinase 2.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1030 - - gmx:100803999 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1030 09 30739732 30743082 Dod09g1030 09 30739732 30743082 ECH