Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1023 ATGGAGCTGAAGAATGAGAAGTTAGTCAGGTTCTCCAATGATGGAAAACAGAATCTTGAGCCTTCTTGGGAGAAGACAGATGCCCACATACACCATGAGAAGCCATTCTCAGCATACAAGATTCAAAGAACTCTGAATCCTGAAGGCAGAACTAGTAGTAGTGGTGATAGGAACAGAATCAACATAAGAGTTCCAACCCTTGGGAAATTTAAGGTTTTACCAGAAAACCATCAGCTATGGAAGAAGAGAATTCTTGATCCTGGCAGTGATATCTTTCTAGAGTGGAACCGGGCTTTCCTATGCTCTTGCATAATATCACTGTTTGTTGATCCACTGTTTTTCTACCTACCCTCAGTAGCAAATGATGGGAATTCATCATGCATGGCTACTGACTTGAATATAGGAATTGTTGTGACGTGTTTCCGGACATTTGCTGATGTTTTCTATCTGCTGAACATGGTCATAAAGTTCAGGACGGCCTATGTGTCCCCTAGTTCAAGGGTATTTGGAAGAGGTGAGCTTGTTATGGATCCCAGGTTGATTGCTAGAAGGTACTTGAGATCAGAGTTCTTCCTAGATCTTGTAGCTACACTGCCTCTTCCTCAGATTGTGATATGGTTTATTCTGCCAGCAATTAGAAGCTCCCATGCTGATCACACCAACAATGCTCTTGTACTGATTGTTCTGCTTCAATACGTCCCCAGATTATACTTGATCTTCCCATTAAGCTCTCAGATTATCAAAGCCACCGGTGTCGTTACAAAGACGGCTTGGGCTGGAGCTGCTTACAATCTTTTGCTTTATATGCTAGCTAGTCATGTCTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGCATGCCACTTGCTGGAAATCTGAATGCAGAAATGAAAGCCTCCCCACAAAATGTTTTCTTAGGTACTTGGATTGTAGTTCTTTAAATGATGATGATCGCGTGAAATGGGTAAACACTACTTCTGTGTTTGGAAACTGCAATCCAGCAAACAGCACCAGTTTCAACTATGGGATTTTTGGAAATGCAGTGCAAAATAATGTTGTCTCTTCTACATTTATAGAGAAGTATCTCTATTCTCTATGGTGGGGCTTGCAGAACTTAAGTTCCTATGGCCAGAGTCTGACAACAAGCACATTTGTTGGGGAAACTGCATTTGCAATACTTATAGCTGTTCTGGGTCTAGTTTTGTTTTCCCACTTGATTGGTAACATGCAGACCTATTTGCAATCTATTACTGTGAGGCTTGAAGAGTGGAGGCTTAAGAGACGTGACACTGAAGAGTGGATGAAACATCGCCAGCTCCCACAACATCTCAGAGAGCGTGTCCAAAGATTTGTTCAGTACAAGTGGCTTGCGACTCGAGGCGTTGATGAAGAGACAATCTTAAGAGCCCTGCCAACAGACCTGCGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTACCCTTTTTCTCACAAATGGATGATCAGCTACTTGATGCAATATGTGAGAGATTGGTGTCATCCTTGAGTACTCAAGGCACATACATAGTCAGGGAAGGAGACCCGGTTACAGAGATGCTTTTCATCATCAGAGGAAGACTTGAAAGCTCAACCACAAATGGAGGTAGAACTGGTTTCTTTAATTCTATTACTTTGAGGCCAGGTGATTTCTGTGGAGAAGAGCTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTCAACTTACCTTCCTCTACAAGGACAGTTAGGGCCCTTGTAGAAGTGGAAGCCTTTGCATTAAGAGCAGAAGACCTTAAATTTGTGGCCAATCAGTTTAGACGCCTCCACAGCAAGAAGTTACAGCATACCTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCTGCCTGTTTCATTCAGGCCGCATGGCGCCGGTACAAGAAGAGAATGCTGGCAAAGAGCCTTAGCTTGAGGGAATGCCAGTCCTTCAATGATAATGAACAAGCCAGGAATCAAATGGAAGAAGATCACAGTGCTGTGCCTTCAAACACTACACAGGTGAAACAGAACTTAGGTGTCACTATACTGGCCTCAAGATTCGCTGCTAACACAAGGAGAGGGGCTCAGAAGATCAAGGATGTTGAGATGCCCAAGTTGCAAAAGCCTGAAGAGCCAGACTTCTCAGTAGAGCCTGATGATTAG 2193 0.4368 MELKNEKLVRFSNDGKQNLEPSWEKTDAHIHHEKPFSAYKIQRTLNPEGRTSSSGDRNRINIRVPTLGKFKVLPENHQLWKKRILDPGSDIFLEWNRAFLCSCIISLFVDPLFFYLPSVANDGNSSCMATDLNIGIVVTCFRTFADVFYLLNMVIKFRTAYVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFILPAIRSSHADHTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNESLPTKCFLRYLDCSSLNDDDRVKWVNTTSVFGNCNPANSTSFNYGIFGNAVQNNVVSSTFIEKYLYSLWWGLQNLSSYGQSLTTSTFVGETAFAILIAVLGLVLFSHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQHLRERVQRFVQYKWLATRGVDEETILRALPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRYKKRMLAKSLSLRECQSFNDNEQARNQMEEDHSAVPSNTTQVKQNLGVTILASRFAANTRRGAQKIKDVEMPKLQKPEEPDFSVEPDD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1023 730 Gene3D - 119 419 - -
Dod09g1023 730 MobiDBLite consensus disorder prediction 704 723 - -
Dod09g1023 730 Pfam Ion transport protein 95 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod09g1023 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 54 727 - -
Dod09g1023 730 Gene3D Helix hairpin bin 421 484 - -
Dod09g1023 730 ProSiteProfiles cAMP/cGMP binding motif profile. 493 576 IPR000595 -
Dod09g1023 730 MobiDBLite consensus disorder prediction 704 730 - -
Dod09g1023 730 SUPERFAMILY Voltage-gated potassium channels 87 415 - -
Dod09g1023 730 SMART cnmp_10 493 624 IPR000595 -
Dod09g1023 730 Gene3D Jelly Rolls 491 611 IPR014710 -
Dod09g1023 730 SUPERFAMILY cAMP-binding domain-like 423 615 IPR018490 -
Dod09g1023 730 Pfam Cyclic nucleotide-binding domain 516 604 IPR000595 -
Dod09g1023 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 54 727 - -
Dod09g1023 730 CDD CAP_ED 493 624 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1023 Dod-Chr9 30657199 30661475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1023 10 727 Ion Channels AT2G24610 69.505 0.0 1042
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1023 K05391 - gmx:100803334 1307.74