Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1018 ATGGCGGTGGAGCTCATGGGGCTGTTCCCGAAGATGGACGAACACAAGGCCATAGAAGAGGCCGCCGCAGAAAGCCTCAAGGGAATGGAGCACCTCGCCCGCATCCTCTCCCACCACCCTTCCCACCTCGACACTGACCTCACTAATCTAACCGTTTCCAAGTTCCGAAAACTCATCTCCCTCCTCAACCGCACCGGCCACGCCCGCTTCCGCCGCGCACCCCTTCCCCCTTCCTCTTCCACCTCCTCCGATCTCCCTCACTCCCGCACTCTCAACCTCACTCCTCCTCCTCCTCCGCCGCCGCCGCCGCAGTCGGCGGTTACTTCCGTTGTTCTCCACCATCCTTCGCCGGCGACCTTCGCCCCCGCCCAGCCGCCACAGAGCTTGACTCTCGACTTCACGAAGCCGAACATCCTCACCTCCAACGCGAAATCTGTGGAGCTTGAGTTCTCAAAGGAAACGTTCAGCGTGTCCTCTAACTCGTCGTTCATGTCCTCCGCCATCACCGGCGACGGAAGCGTCTCCAACGGCAAGCTCGGATCTTCGATCTTCCTCGCTCCGGCGGCGGCTTCGGGCGGAAAACCGCCGCTGTCGTCGGTGCCGAGCAAGAAGCGGTGCCACGACCACCTCGACCACTCCGACAACGTCTCGGGGAAGCTCTCCGGCTCCTCCAGCAAGTGCCACTGCACCAAGCGAAGGAAAAATCGGGTGAAGAAAACGGTTAGAGTGCCGGCGATTAGTTCGAAGATCGCCGATATACCGCCGGACGAGTTCTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGGTCGCCGTATCCCAGGGGGTATTACAAGTGCAGCACAGTGAGGGGGTGCCCGGCGAGGAAACACGTGGAACGAGCACCGGACGATCCGTCGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCACGCTATGCAGACCGCGATGCAGGATAGCATTTCCGGAGGAGTGGGTTTGGTATTCCAGTCAACGTGA 1002 0.6078 MAVELMGLFPKMDEHKAIEEAAAESLKGMEHLARILSHHPSHLDTDLTNLTVSKFRKLISLLNRTGHARFRRAPLPPSSSTSSDLPHSRTLNLTPPPPPPPPPQSAVTSVVLHHPSPATFAPAQPPQSLTLDFTKPNILTSNAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKLGSSIFLAPAAASGGKPPLSSVPSKKRCHDHLDHSDNVSGKLSGSSSKCHCTKRRKNRVKKTVRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPSMLIVTYEGEHRHAMQTAMQDSISGGVGLVFQST* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1018 333 SMART WRKY_cls 254 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1018 333 MobiDBLite consensus disorder prediction 195 227 - -
Dod09g1018 333 Pfam WRKY DNA -binding domain 256 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1018 333 Pfam Plant zinc cluster domain 203 252 IPR018872 -
Dod09g1018 333 Gene3D WRKY domain 240 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1018 333 SUPERFAMILY WRKY DNA-binding domain 252 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1018 333 ProSiteProfiles WRKY domain profile. 249 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1018 333 PANTHER WRKY PROTEIN 11 330 - -
Dod09g1018 333 MobiDBLite consensus disorder prediction 70 109 - -
Dod09g1018 333 MobiDBLite consensus disorder prediction 75 90 - -
Dod09g1018 333 MobiDBLite consensus disorder prediction 91 106 - -
Dod09g1018 333 MobiDBLite consensus disorder prediction 201 215 - -
Dod09g1018 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 330 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1018 Dod-Chr9 30576796 30579007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1018 1 332 WRKY Transcription Factor Family AT2G24570 60.234 4.22e-118 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1018 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1018 - - gmx:100127394 445.277