Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0992 ATGGAGTTGATGGGAGGTGAAAATTTTAGTACATGTCTTGTTCTGTTGTTGTTCAATTTGATGTTAGTTGGTTCAGTGAGTGGAATTGGTGTTAACTGGGGCACACAGGCCACACACCCTTTGCCACCATCCACTGTGGTGAAAATGCTGAAAGACAATGGCATTCAGAAGGTTAAGCTATTTGATGCTGACCCCAGAATCTTAGATGCTTTGAAGAAGTCTGGGATCCAGGTGATGGTGGGGATTCCGAATGACATGCTCTATACACTGGCTAACAGTGTGCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTTTCTGCACACATCTCTTCTGGAGGATTAGACATCAGGTACGTTGCAGTGGGGAATGAACCATTCCTGTCCACATACAACGGCACCTTCGAAGCCACAACTCTTCCAGCTCTTCAAAACATCCAAGCAGCACTCACAAAATCCGGCTTGGGCAACAAGGTCAAAGTCACTGTCCCATTAAACGCAGACGTATACCAGAGCTCATCAGAAAAGCCTTCCGATGGCGACTTCAGGCCCGACATCCAGAACCTCATGCTTCAGATTGTCAAGTTCTTAAACGACAATGCAGCTCCATTCACTGTGAACATCTACCCTTTCATCAGCCTCTACTCAGACCCCAATTTCCCTGTTGACTATGCATTCTTCAATGGCTACCAGTCTGCTATAAATGACAATGGGAAGACCTATGACAATGTGTTTGACGCCAACCATGACACTCTAGTTTGGGCACTTCAGAAGAATGGCTTTGGAAACTTGCCCATTATTGTTGGGGAAATTGGTTGGCCTACTGATGGAGACAGGAATGCAAATCTCCAATATGCACAACGTTTTAACCAAGCTTTTATGTCACGTTATTATATTTCTGCAAAGGGTACCCCAATGAGGCCTGGTCCTGTTGATGCATACTTGTTTAGCCTCATAGATGAAGACAATAAGAGCATTGAGCCAGGTAACTTTGAGAGACATTGGGGTTTGTTTTACTTTGATGGAAGACCTAAGTACCAGCTTAACATTGGATCAACTAGAGGCAGCAACAATGGGTTAGTACCAGCTAGTGGTGTTGGGTATTTGGCAAAGAAGTGGTGTGTTTTGAAGCCCTCAGCAAACCTTAATGATGACCAAGTTGCACCAAGTGTGGCATATGCTTGTCAGAATGCTGATTGCACTAGTCTTGGGTATGGTACTTCATGTGGCAATTTGGATGCTCATGGTAACATCTCTTATGCATTTAATAGCTACTACCAGATAAATGACCAGGGGGACAATGCTTGCAAGTTCCCGGGGCTTTCCATGGTCACTGATAAGGACCCTTCGTTTGGGACTTGCAGGTTTATAATCATGATCCAGACCGATTCCGCAGGGCTAGATGGGAGAGTTGGGTTTACAGGAACAGTGCTCTTGGTGTTCTTGTTTTTCACTCTTCTGTAA 1461 0.447 MELMGGENFSTCLVLLLFNLMLVGSVSGIGVNWGTQATHPLPPSTVVKMLKDNGIQKVKLFDADPRILDALKKSGIQVMVGIPNDMLYTLANSVQAAEKWVSKNVSAHISSGGLDIRYVAVGNEPFLSTYNGTFEATTLPALQNIQAALTKSGLGNKVKVTVPLNADVYQSSSEKPSDGDFRPDIQNLMLQIVKFLNDNAAPFTVNIYPFISLYSDPNFPVDYAFFNGYQSAINDNGKTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQAFMSRYYISAKGTPMRPGPVDAYLFSLIDEDNKSIEPGNFERHWGLFYFDGRPKYQLNIGSTRGSNNGLVPASGVGYLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDAHGNISYAFNSYYQINDQGDNACKFPGLSMVTDKDPSFGTCRFIIMIQTDSAGLDGRVGFTGTVLLVFLFFTLL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0992 486 SMART X8_cls 371 455 IPR012946 -
Dod09g0992 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 463 IPR044965 GO:0004553|GO:0005975
Dod09g0992 486 Pfam X8 domain 371 441 IPR012946 -
Dod09g0992 486 Gene3D Glycosidases 28 356 - -
Dod09g0992 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 16 463 - -
Dod09g0992 486 Pfam Glycosyl hydrolases family 17 29 348 IPR000490 GO:0004553|GO:0005975
Dod09g0992 486 Gene3D - 368 464 - -
Dod09g0992 486 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Dod09g0992 486 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0992 Dod-Chr9 30236041 30238746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0992 9 464 Glycoside Hydrolase AT4G31140 69.737 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0992 K19893 - gmx:100796552 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0992 09 30236041 30238746 Dod08g1434 08 27236600 27242056 PCT