Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0971 ATGGGTGTAGATTACTACAATATATTGAAGGTAGATAGAAATGCAACGGAGGATGATCTGAAGAAAGCATATAGAAAGTTGGCAATGAAATGGCATCCTGACAAGAACCCCACCAAAAAGAACGAAGCTGAAGCCAAGTTCAAGCAGATCGCTGAGGCCTATGAGGTATTGAGTGATCCTCAGAAAAGGGTGGTTTATGATCAGCTAGGAGAGGAAGGGTTGAAAGATAGGCCACCACCTGGTAATGAACCATCAAATGGGTTTAATCCCAGAAATGCAGATGATATTTTTTCTGAATTCTTTGGAAATAACCCTTTTGGAGGAGGGGGAATATTTGGTGGATTCAGTGGAAGTGACTTCAGAACATATAGTGAAAGGGGCCACGTCCCAAAGAAGCCGCCACCTGTGGAGACCAAATTGCCGTGCAGTTTGGAGGAGTTGTACACTGGATCTACAAGAAAAATGAAGATCTCAAGGACTGTGATGGACAACGGGTGGCCAGTTAAAGAAACTGAGATATTAACCATAGATGTAAAGCCTGGATGGAAGAAGGGTACAAAGATTACTTTCCCAGACAAAGGGAACCAGCAACCGAACCAGCTGCCAGCAGACCTTGTGTTTGTGATCGATGAGAAGCCTCATGATTTGTTCAAGAGAGATGGCAATGACCTTGTTTTGAGCAAAAGGGTGTCACTAGCTGAGGCCATTGGAGGAACTTCAGTAAACATCACGACCCTCGACAAGCGCAGCTTATGCATGCCGGTGACCGACATAGTGAGCCCTGGCTATGAGTTGGTTGTTGCAAAGGAAGGGATGCCAATAACCAAGGAGCCAGGTCATAAGGGTGATTTGAGGATCAAGTTTGAGGTCAAGTTCCCTACAAAGTTGACACAAGAGCAAAGGGAAGGACTCAAGAAAGCATTGGGTGGTTGA 933 0.4512 MGVDYYNILKVDRNATEDDLKKAYRKLAMKWHPDKNPTKKNEAEAKFKQIAEAYEVLSDPQKRVVYDQLGEEGLKDRPPPGNEPSNGFNPRNADDIFSEFFGNNPFGGGGIFGGFSGSDFRTYSERGHVPKKPPPVETKLPCSLEELYTGSTRKMKISRTVMDNGWPVKETEILTIDVKPGWKKGTKITFPDKGNQQPNQLPADLVFVIDEKPHDLFKRDGNDLVLSKRVSLAEAIGGTSVNITTLDKRSLCMPVTDIVSPGYELVVAKEGMPITKEPGHKGDLRIKFEVKFPTKLTQEQREGLKKALGG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0971 310 SUPERFAMILY HSP40/DnaJ peptide-binding domain 217 302 IPR008971 GO:0006457|GO:0051082
Dod09g0971 310 SMART dnaj_3 3 62 IPR001623 -
Dod09g0971 310 Gene3D - 213 309 - -
Dod09g0971 310 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 310 - -
Dod09g0971 310 MobiDBLite consensus disorder prediction 70 92 - -
Dod09g0971 310 CDD DnaJ 4 59 IPR001623 -
Dod09g0971 310 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 310 - -
Dod09g0971 310 Gene3D - 135 212 - -
Dod09g0971 310 Gene3D DnaJ domain 3 111 IPR036869 -
Dod09g0971 310 Pfam DnaJ C terminal domain 136 293 IPR002939 -
Dod09g0971 310 SUPERFAMILY Chaperone J-domain 3 118 IPR036869 -
Dod09g0971 310 CDD DnaJ_C 134 296 - -
Dod09g0971 310 PRINTS DnaJ domain signature 6 24 IPR001623 -
Dod09g0971 310 PRINTS DnaJ domain signature 62 81 IPR001623 -
Dod09g0971 310 PRINTS DnaJ domain signature 42 62 IPR001623 -
Dod09g0971 310 PRINTS DnaJ domain signature 24 39 IPR001623 -
Dod09g0971 310 Pfam DnaJ domain 4 67 IPR001623 -
Dod09g0971 310 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Dod09g0971 310 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Dod09g0971 310 SUPERFAMILY HSP40/DnaJ peptide-binding domain 135 215 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0971 Dod-Chr9 29952596 29954781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0971 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 5.50e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0971 K09510 - tcc:18588934 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0971 09 29952596 29954781 Dod09g0971 09 29952596 29954781 ECH