Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0968 ATGAGCATCCGCGCACCCCCTTGTTTTCTTGGATTGTGGGCTATGCATCCGGATGTGTTGCTACCCTCCCTCTACTTTATTGGCGATATTATCATAGTCACTGCGCTCAAGAGCAGGATTCAACTCGGTCGCAACAAAGTTCCCCTCGGATTAATGATCATCCCGGTACACTCCTTTCCACTTCCAGGATCAATGGTGGAGGAGAAGATGATCAAGCTTGCTGCTGGATCCTCCAGAAGCAATCTAGCCTCATGGATGATGAATGCTAGCAGACTAAAGGTACTTGTGGACTACTTCAAAATGGCCATAGATTGCTTTTTTGCTATATGGTTTGTCATGGGAAATGTTTGGATTTTCGGAGGACATGCATCTATTGATGAAACTCCTAATTTGTACAGAAAAACAGAAGCAGGGGTGAAAGCAACTCAGACGTCGGTGAAGGTGGAATTGTGGCTGCGGAGAACTGAAAAGGAACGAACGATATCCGGAGAAGATGCAGTTTGCTGCATCTGCCTGGCCAAGTATGAAAACAACGATGAGCTGAGAGAATTGCCTTGTTCTCATCTTTTCCACAAAGAATGCGTGGATAAGTGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAGTGAGGTTGGTGATAATGTAACAGGATCAGTATCTGGGGAGGATGCAAACCAACAAAGGAGTGAAAGCAGGGTTGAGAATGGCCACGCCAATGCCTAA 726 0.4559 MSIRAPPCFLGLWAMHPDVLLPSLYFIGDIIIVTALKSRIQLGRNKVPLGLMIIPVHSFPLPGSMVEEKMIKLAAGSSRSNLASWMMNASRLKVLVDYFKMAIDCFFAIWFVMGNVWIFGGHASIDETPNLYRKTEAGVKATQTSVKVELWLRRTEKERTISGEDAVCCICLAKYENNDELRELPCSHLFHKECVDKWLKINALCPLCKSEVGDNVTGSVSGEDANQQRSESRVENGHANA* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0968 241 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 74 134 - -
Dod09g0968 241 MobiDBLite consensus disorder prediction 218 241 - -
Dod09g0968 241 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 154 233 - -
Dod09g0968 241 SMART ring_2 168 208 IPR001841 -
Dod09g0968 241 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 74 134 - -
Dod09g0968 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 214 IPR013083 -
Dod09g0968 241 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 154 233 - -
Dod09g0968 241 Pfam Ring finger domain 168 209 IPR001841 -
Dod09g0968 241 SUPERFAMILY RING/U-box 159 214 - -
Dod09g0968 241 ProSiteProfiles Zinc finger RING-type profile. 168 209 IPR001841 -
Dod09g0968 241 CDD RING-H2_RNF111_like 167 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0968 Dod-Chr9 29925968 29928413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0968 155 219 C3H Transcription Factor Family AT1G80400 64.615 1.91e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0968 - - gmx:100785559 169.088