Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0966 ATGAACAAAGCAAATAAAGCCAGTGCCAAAGACGAAGAGCGTCCACTCCGAATCACTAGAGCAAGGGCTAGAGCCTTGGGATCAGTGGGAGGGATACCTCCCTACTCAAGACCATCCTTTAAAAATGAGCAGAAGAATGTACTTAGAGCAAACTCCAAAAGAACAGCATCTGATGAGAACAAAACTTCTATGGTTGCCCCTGCTGATCCTCAGCATAAGAGAAAGGCAGTGCTTACAGATGTAACTAACATCACTACTAATGCATCAAAATTTCAGGCAAGAAGAGTATATAAGAAGCAAAACACAGAGCCAGCTTCAGCTGTCTCCTTTGAAGTTTTGTCATCACAAGAAGATGCTAAAGCAAAGTTAGCCGAAGAACTGTCCACAATAAGGATGGTAGAATCACATGACACCATTGGTTGGGAAAATTTGGATGACAAATGGCCAGCAGGACATTGTATTTCCAATAGCACAAGAGACCGTGGTATAGCAGACGCCACGCTTTCAGTGCAAGACTCTGTGAAATCTGATGAACTCCCAAGCTCTCCAAATAAAGACATAGATATGATTTGCGAGAAACTAGGAGCTTCAGATTGCCTGGCCATTGTGGACATTGATTCGGAGTTTAAGGATCCTCATGTTTGGAGTTCTTACGCCCCTGATATATACAACAATGTTCGGGTCACAGAGCTTCAAAGGAGACCATTTACCAATTACATGGGAACGTTGCAGCAAGATATCACTCCAAGCATGCGGGGAATCCTGATTGATTGGCTTGTAGAGGTTTCTGAGGAATATAAGTTGGTTCCAGACACTCTTTACCTTACAGTGAACCTCATCGACCGGTTTCTCTCAACAAATTTGATTCAGAAACAAAGGCTCCAGTTGCTTGGTGTTACCTGCATGCTTATTGCATCAAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAGGAATTTTGCTTCATCACAGATAATACATACACCAAAGAAGAGGTATTGAAAATGGAGAGTGAAGTGCTAAACATTTTGAATTTTCAATTATCTGTTCCCACAACCAAAACATTTCTCAGGAGATTCATTCAAGCAGCACAATCTTCTTACAAGGTTCCTCAGATTGAACTCGAATTCCTGGCAAACTATTTAGCAGAGCTTACCCTTGTTGAGTACAGCTTCTTGCAGTTTCTACCTTCCCTCATAGCTGCATCTGCTGTATTCCTTGCTAGATGGACACTCAACCAGTCAGAACATCCATGGAATCCAACTCTGCAGCACTATACAAACTACAGAGCCTCAGAGCTTGAAACTGTTGTTCTTGCACTGGCAGATTTGCAACTCAATACCAAAGTCTGTCCCCTGAATGCTATACGGGAGAAATATAAACAACAGAAGTTCAATTGTGTGGCAAGACTGTCTCCAAAACCAGTGCAGTCACTCTTCCAAGTACAAGTGTAA 1452 0.4236 MNKANKASAKDEERPLRITRARARALGSVGGIPPYSRPSFKNEQKNVLRANSKRTASDENKTSMVAPADPQHKRKAVLTDVTNITTNASKFQARRVYKKQNTEPASAVSFEVLSSQEDAKAKLAEELSTIRMVESHDTIGWENLDDKWPAGHCISNSTRDRGIADATLSVQDSVKSDELPSSPNKDIDMICEKLGASDCLAIVDIDSEFKDPHVWSSYAPDIYNNVRVTELQRRPFTNYMGTLQQDITPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTNLIQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKEEVLKMESEVLNILNFQLSVPTTKTFLRRFIQAAQSSYKVPQIELEFLANYLAELTLVEYSFLQFLPSLIAASAVFLARWTLNQSEHPWNPTLQHYTNYRASELETVVLALADLQLNTKVCPLNAIREKYKQQKFNCVARLSPKPVQSLFQVQV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0966 483 Gene3D - 235 348 - -
Dod09g0966 483 MobiDBLite consensus disorder prediction 39 64 - -
Dod09g0966 483 Pfam Cyclin, N-terminal domain 221 348 IPR006671 -
Dod09g0966 483 PANTHER CYCLINS 52 479 IPR039361 -
Dod09g0966 483 CDD CYCLIN 251 340 IPR013763 -
Dod09g0966 483 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Dod09g0966 483 Pfam Cyclin, C-terminal domain 350 472 IPR004367 -
Dod09g0966 483 SMART cyclin_7 354 442 IPR013763 -
Dod09g0966 483 SMART cyclin_7 257 341 IPR013763 -
Dod09g0966 483 PIRSF Cyclin_A_B_D_E 5 482 IPR039361 -
Dod09g0966 483 CDD CYCLIN 348 428 IPR013763 -
Dod09g0966 483 MobiDBLite consensus disorder prediction 28 72 - -
Dod09g0966 483 Gene3D - 221 469 - -
Dod09g0966 483 SUPERFAMILY Cyclin-like 349 472 IPR036915 -
Dod09g0966 483 PANTHER CYCLIN-A2-4 52 479 - -
Dod09g0966 483 SUPERFAMILY Cyclin-like 210 347 IPR036915 -
Dod09g0966 483 SMART Cyclin_C_2 350 473 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0966 Dod-Chr9 29907135 29912962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0966 7 479 Core Cell Cycle Gene Families AT5G25380 53.958 9.14e-159 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0966 K06627 - gmx:547780 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0966 09 29907135 29912962 Dod09g0966 09 29907135 29912962 ECH