Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0965 ATGGCACAAGCTCAGCACCATAGCAACAATGGCGGAAACAACACCAACACCAACACCAACACCAACACTGGGAGTGGGAGTGGGAGCAGCCAACAGCCGTTGCTGAAACCTGTTCTCCATGACTTCCTTGGCATGAAGCCCTCCGATGTCAGGCTCCCCGAGCCATCTCCGTCGTCATCTTCCGGCGGCGGAGCACGCGGCCCCTTCTCCTCCTCCGCCGTCTCTGACATCGCTTCTGAAAAACAGGTAGGAAATCATCTTGAGGGAGTTCCATTCTATGGCCCAAGGAGTGATTTTTCTGGCACTGAGATAAGTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACATTTATGGGCTCCTCCAGAGATGCCTTTCAGATGGTCCCTGACTCCTTTCAAAACTTCATGAAGGTCATCCGCAATGCTGCTGGAGGAGAGAAGCTTAGAAGGCCCAATGATGATGAAGTGTTGCTTGGTATGCAGTCACTGAAGCCAACTTCTGCTTCTCTTTTTCAGCCTCCCGCTAGCACTAAGGCTGATGCCAGTAAATGGGAACGATCTTTTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCGCGTGGGGGGCAACTGACACCTTTTGTACACCAAATAACTTCAAACAAGATGAGGGATACCAATGCTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATCAAGGGGCCTGGAATTTTAAGTTCTATAAACCCAAATGCCACTGCCACCGAGAAAACTTCATCTGCATTGCTTCTTGGTGGAAGCAGGCAAAAGCCTGTAACTAATGTTCTAGAACCGGAATCAGCCACACCTCCAAGTCAAACATCTGCCAGCCGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTAGCTGGTTCAAATGGTGGATCTTGGTCAACAGCATTCTCGCCAAAACCTGCTGGAAAGCTGGCTAATGATAGTAACTTGCATAGCGGAGAAAATGAAACAGGTATCCCACAGGAGCTTCATGGGAGATTGCCTATTACTGGCAGTTCTAGCCATGCCATTGGGCCTGGTGATCGAGTATCTGCTCCAGCAGTGGCACACCAGGGAAGCATTGTGGCTAAAGATACAAGAAATCAGGTTCAAGCAGCTGATCCCAGTTCTGAAGACAAAAGAGTACAATGA 1245 0.4827 MAQAQHHSNNGGNNTNTNTNTNTGSGSGSSQQPLLKPVLHDFLGMKPSDVRLPEPSPSSSSGGGARGPFSSSAVSDIASEKQVGNHLEGVPFYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNFMKVIRNAAGGEKLRRPNDDEVLLGMQSLKPTSASLFQPPASTKADASKWERSFLMNVGPSMQHPPRGGQLTPFVHQITSNKMRDTNAGPSFISQSAADEGSRTGIKGPGILSSINPNATATEKTSSALLLGGSRQKPVTNVLEPESATPPSQTSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKPAGKLANDSNLHSGENETGIPQELHGRLPITGSSSHAIGPGDRVSAPAVAHQGSIVAKDTRNQVQAADPSSEDKRVQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0965 414 MobiDBLite consensus disorder prediction 53 76 - -
Dod09g0965 414 MobiDBLite consensus disorder prediction 393 407 - -
Dod09g0965 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 54 412 IPR040390 -
Dod09g0965 414 PANTHER PROTEIN TIFY 8 54 412 - -
Dod09g0965 414 Pfam tify domain 292 324 IPR010399 -
Dod09g0965 414 SMART tify_2 290 325 IPR010399 -
Dod09g0965 414 MobiDBLite consensus disorder prediction 1 76 - -
Dod09g0965 414 MobiDBLite consensus disorder prediction 1 34 - -
Dod09g0965 414 MobiDBLite consensus disorder prediction 365 414 - -
Dod09g0965 414 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0965 Dod-Chr9 29876976 29883302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0965 36 323 Tify Gene Family AT4G32570 40.453 3.87e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod09g0965 tify 2.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0965 - - ahf:112707837 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0965 09 29876976 29883302 Dod09g0965 09 29876976 29883302 ECH
Dod08g1645 08 38686093 38692392 Dod09g0965 09 29876976 29883302 PCT