Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0956 ATGAAGGAAGTTATTCATCCAAAAGTATTTAACTTCTCACTTTTACACTTTATCAACTTCCTCATTTTAAAGGAGCCAAATCCAATCGTCTTACCATTGCAGCCTTTGTTTTTCTTATACATTATTATTGACTCTTGTAATGCTAATTCCATTCACATTGTTTTAATTCGGATCACGCAGAACTTCAAGGAGAGAGTTGGTCTTGGAGTTGGTCTTGGAATTGCTAAATTCGACACAACCGTTGGTTGGGACGTGCCTTTTCACTTTCACTGTGCCCATATGGTATCAAATATCATCATCACTCTGAAAAATAATAAAACTTCAATTGGAACAAAAGTCGTGCCTGTTGAGAACATCTTGAATGGTCAGGAAACAGAAACAAAGGTTGAAAGATTGGACAAGCATGGTCTAGAGATCGTCGTTAAGCTACAATACCTTGATGTTAAAAAAGACCATAACTGGGGTCAAGGCATTAAAAGTCCTGAATTTTCTGGGGTTCCTAATACTTACTTCCCACAAAGAAACGGATGTAAGGTCTCTCTTTACCAAGATGCTCATGTCCCGGATAGTTTTACTGAAGGCCAGCCTTACCAGCCTAAAAGTTGTTGGGAAGATGTCTTTGATGCAATCAATGGTGCAAAGCACATAATATACATTACAGGGTGGTCTGTTTACACTAAGATTTCCTTGCTAAGGGATTCTAGGAGGCCAGCGCTTGAAAGAGGCATAACACTTGGTGAGCTTCTCAAGAAAAAAGCAAATGAAGGGGTCCAGGTTTTAATGCTTGTTTGGGATGATAAAACAGGTATAATGAATACTCATGATAAAGAAACCATGGAGTCCTTCAGGGGCACTGGAGTGCATTGTGTTTTGTGCCATCGCAAGCCTGGTGATGATGCAGGCCTTTGGGAGAAGGTTAAAACGGCTTTCATGTGGACTCATCACCAGAAAACGGTGGTGGTGGATAGTGGATTGCCTCGTGGAGGGTCAGAAAAGCGAGGAATAGTGAGTTTTGTCGGAGGGATTGATTTATGTGATGGAAGATATGACACTCCCTCGCATTCACTTTTTAGGACACTCGACACGGATCACCATGTTGATTTTCACCAACCTAACTTCTCTGGTTCTGAAATTAGAAAAGGTGGTCCTAGAGAACCTTGGCATGACATCCACGCTCGTCTTGAAGGGCCCATTGCTTGGGATGTTTTGAAAAACTTTGAGCAGAGATGGAAGAAGCAGGGTAAAGATGGTGTCGAATTGAAAGAACTTGAAGGTATGATTATTGACCAATCCAAACTTCGGTTCAGTGATGACGATCATCAGACTTGGTGTGTTCAATTATTTAGATCAATTGATAGTGGATCTGCTTTTGGGTTTCCAAAGATTCCAGAAGCTGCTGCTGGAATTGGGCTTGTTAGTGGCAGGAATAATATAATTGATCGGAGCATTCAAGATGCTTATATTAGCGCTATTAGACGTGCTAAGAATTTCATCTATATTGAGAGTCAGTATTTCCTGGGAAGCTCTTTTGCATGGAATTCTAAAGGCATTAAGCTTGAGGAGATTAATTCTTGGCATCTAATACCAAAGGAACTCTCACTTAAGATTGTTAGGAAAATTGAAGCTGGGGAAAGGTTCAATGTGTATGTTGTGGTTCCTATGTGGCCAGAGGGTAATCCAAAATGCAATACGGTTCAGCAAATATTGTTTTACCAGACGAAGACAATGGAGATGATGTACAAGGATGTTATTCGGGCCCTCAGAGCCAAGGGAAGTAGGGAAGATCCTCGGAACTACTTGGCATTCTTCTGCCTTGGCAATCGGGAGGAGAAGAAAGGAGAATACCAGCCTCCAAAGAGGCCAAAGAAAAATTCTCACTACATAAGAGCTCAAGAGACCCGACGTTTCATGATTTATGTTCATTCCAAGATGATGATCGGTGAATCACAAAATAAAGCTTGGATATTTTGTTAA 1974 0.4088 MKEVIHPKVFNFSLLHFINFLILKEPNPIVLPLQPLFFLYIIIDSCNANSIHIVLIRITQNFKERVGLGVGLGIAKFDTTVGWDVPFHFHCAHMVSNIIITLKNNKTSIGTKVVPVENILNGQETETKVERLDKHGLEIVVKLQYLDVKKDHNWGQGIKSPEFSGVPNTYFPQRNGCKVSLYQDAHVPDSFTEGQPYQPKSCWEDVFDAINGAKHIIYITGWSVYTKISLLRDSRRPALERGITLGELLKKKANEGVQVLMLVWDDKTGIMNTHDKETMESFRGTGVHCVLCHRKPGDDAGLWEKVKTAFMWTHHQKTVVVDSGLPRGGSEKRGIVSFVGGIDLCDGRYDTPSHSLFRTLDTDHHVDFHQPNFSGSEIRKGGPREPWHDIHARLEGPIAWDVLKNFEQRWKKQGKDGVELKELEGMIIDQSKLRFSDDDHQTWCVQLFRSIDSGSAFGFPKIPEAAAGIGLVSGRNNIIDRSIQDAYISAIRRAKNFIYIESQYFLGSSFAWNSKGIKLEEINSWHLIPKELSLKIVRKIEAGERFNVYVVVPMWPEGNPKCNTVQQILFYQTKTMEMMYKDVIRALRAKGSREDPRNYLAFFCLGNREEKKGEYQPPKRPKKNSHYIRAQETRRFMIYVHSKMMIGESQNKAWIFC* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0956 657 SUPERFAMILY Phospholipase D/nuclease 469 646 - -
Dod09g0956 657 Gene3D Endonuclease Chain A 185 431 - -
Dod09g0956 657 Pfam Phospholipase D Active site motif 311 348 IPR001736 GO:0003824
Dod09g0956 657 SMART pld_4 310 348 IPR001736 GO:0003824
Dod09g0956 657 PANTHER PHOSPHOLIPASE D 79 647 IPR015679 -
Dod09g0956 657 Gene3D Endonuclease Chain A 448 647 - -
Dod09g0956 657 PANTHER PHOSPHOLIPASE D ALPHA 3 79 647 - -
Dod09g0956 657 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 310 348 IPR001736 GO:0003824
Dod09g0956 657 SUPERFAMILY Phospholipase D/nuclease 149 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0956 Dod-Chr9 29597716 29599689 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0956 83 650 Phospholipase D Gene Family (Wang group) AT3G15730 62.919 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0956 K01115 - pop:18096711 782.711