Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0952 ATGCAGGACTTCATGGAGAAAGTTGGTCTTGGAGTTGGTCTTGGAATTGCTAAATTCGACATAACCGTTGGATGGGGCGTGCCTGTTCACTTTCATTGTGGCCATATGGTATCAAATATCAGCATCACTCTAGAAGATAATGGAACTTCAATTGGAAAAAAAGATGTGCCTGTTGAGAACATCTTAAATGGTCAGGAAATAGAAACACGGGTTGAAATATCGGGCAAGGATGGTCCAGTGATCCCTGTCAAGCTACAATACCTTGATGTTAAAGAAGACAGCAACTGGGATCGAGGCATTGGAAGTCTTGAATTTTCTGGGGTTCCTAATGCTTTCTTCTCACAAACAAAAGGATGTAAGGTCTCTCTTTACCAAGATGCTCATGTCCCGGATAGTTTTAGCCCAAACATAACACTTGCTAAAGGCCAGCTTTACCAGCCTAAAAGTTGTTGGGAAGATGTCTTTGATGCGATCAATAATGCAAAGCACATAGTATACATTACAGGTTGGTCTGTTTACACTAAGATTTCCTTGATAAGGGATTCTAGGAGGCCAGCGCTTGAAAGAGGCACAACACTTGGTGAGCTTCTCAAGAAAAAAGCAAATGAAGGGGTCCAGGTTTTAATGCTTGTTTGGCATGATAAAATAGGTATAATGACTACCCATGACAAAGAAACCAGGCAGTACTTCAGTGGCACTGGAGTGCACTGTGTTTTGTGCCATCGCCAACCTGACGATGATGAAGGCTACTTGGAGAAGGCTAAAATGCCTTTCGAGTGGACTCATCACCAGAAAACTGTGGTGGTGGATAGTGAATTGCCTCATGCACAGTCAGAAGGCGATACGGTTCAGGAAATATTGTTTTATCAGAAGAAGACAATCGAGATGATGTACAAGGATGTTATTCAGGCACTCAAATCCAAGGGAAGTGGGGAAGATCCTCGAAACTACTTGGCATTCTTCTGCCTTGGCAATCGGGAGAAGAAGATGGAAGGAGAATACCAGCCTCTAGAAAGGCCAAAGCAGACTTCTCACTATATGAGAGCCCAAGAGGGCCGACGTTTCATGATTTATGTTCATTCCAAGATGATGATCGGTAAATCAGAAAATAAAGCTTGGATTTTTTTTGTTAGATCAATCTTATAA 1146 0.4223 MQDFMEKVGLGVGLGIAKFDITVGWGVPVHFHCGHMVSNISITLEDNGTSIGKKDVPVENILNGQEIETRVEISGKDGPVIPVKLQYLDVKEDSNWDRGIGSLEFSGVPNAFFSQTKGCKVSLYQDAHVPDSFSPNITLAKGQLYQPKSCWEDVFDAINNAKHIVYITGWSVYTKISLIRDSRRPALERGTTLGELLKKKANEGVQVLMLVWHDKIGIMTTHDKETRQYFSGTGVHCVLCHRQPDDDEGYLEKAKMPFEWTHHQKTVVVDSELPHAQSEGDTVQEILFYQKKTIEMMYKDVIQALKSKGSGEDPRNYLAFFCLGNREKKMEGEYQPLERPKQTSHYMRAQEGRRFMIYVHSKMMIGKSENKAWIFFVRSIL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0952 381 PANTHER PHOSPHOLIPASE D 23 272 IPR015679 -
Dod09g0952 381 PANTHER PHOSPHOLIPASE D 276 366 IPR015679 -
Dod09g0952 381 SUPERFAMILY Phospholipase D/nuclease 92 272 - -
Dod09g0952 381 PANTHER PHOSPHOLIPASE D ALPHA 2 23 272 - -
Dod09g0952 381 PANTHER PHOSPHOLIPASE D ALPHA 2 276 366 - -
Dod09g0952 381 Gene3D Endonuclease Chain A 137 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0952 Dod-Chr9 29483087 29484922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0952 265 369 Phospholipase D Gene Family (Wang group) AT3G15730 60.000 9.30e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0952 K01115 - atr:18431892 302.367